DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and Ccn3

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_110495.1 Gene:Ccn3 / 81526 RGDID:621553 Length:351 Species:Rattus norvegicus


Alignment Length:142 Identity:42/142 - (29%)
Similarity:57/142 - (40%) Gaps:42/142 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YLLLVMAASGGSNHVVNGLKC--YCNPKECDVIRSPDC-PGKGLMLWDPCKCCRICAKTLGESCG 130
            :|||.:.     |.|...|:|  .| |.:|..| ||.| ||...:| |.|.||.:||:..|||| 
  Rat    14 FLLLHLL-----NQVSATLRCPSRC-PSQCPSI-SPTCAPGVRSVL-DGCSCCPVCARQRGESC- 69

  Fly   131 GPGGFSGQCEP-----PLQCVTKLPISSGLGVCMDLQHLTALTYSQHDNCSDSDSIV------LE 184
                  .:..|     .|.|......::..|:||         ..:.|||. .|.::      .|
  Rat    70 ------SEMRPCDQSSGLYCDRSADPNNETGICM---------VPEGDNCV-FDGVIYRNGEKFE 118

  Fly   185 PGCEITNKRCQC 196
            |.|:.   .|.|
  Rat   119 PNCQY---HCTC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 22/59 (37%)
Ccn3NP_110495.1 IB 28..97 CDD:197525 25/78 (32%)
VWC 104..164 CDD:214564 7/28 (25%)
CT 263..332 CDD:214482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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