DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and Ccn2

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_071602.1 Gene:Ccn2 / 64032 RGDID:621392 Length:347 Species:Rattus norvegicus


Alignment Length:104 Identity:32/104 - (30%)
Similarity:41/104 - (39%) Gaps:23/104 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VSALLIYLWCYLLLVMAASGGSNHVVNGLKC--YCNPKECDVIRSPDCPGKGLMLWDPCKCCRIC 121
            ||..|:.|.|            .....|..|  .|   :|....:|.||....::.|.|.|||:|
  Rat     9 VSLALVLLLC------------TRPATGQDCSAQC---QCAAEAAPRCPAGVSLVLDGCGCCRVC 58

  Fly   122 AKTLGESCGGPGGFSGQCEP--PLQCVTKLPISSGLGVC 158
            ||.|||.|..    ...|:|  .|.|....|.:..:|||
  Rat    59 AKQLGELCTE----RDPCDPHKGLFCDFGSPANRKIGVC 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 20/55 (36%)
Ccn2NP_071602.1 IGFBP <39..80 CDD:395164 18/44 (41%)
VWC 101..160 CDD:214564
TSP1_CCN 197..240 CDD:408805
Heparin-binding. /evidence=ECO:0000250|UniProtKB:P29279 245..347
GHB_like 251..343 CDD:419725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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