DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmpy and CCN1

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001545.2 Gene:CCN1 / 3491 HGNCID:2654 Length:381 Species:Homo sapiens


Alignment Length:116 Identity:32/116 - (27%)
Similarity:48/116 - (41%) Gaps:30/116 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 CYCNPKECDVIRSPDC-PGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCE--PPLQCVTKLP 150
            |:| |.|     :|.| ||.||:. |.|.||::|||.|.|.|..    :..|:  ..|:|.....
Human    30 CHC-PLE-----APKCAPGVGLVR-DGCGCCKVCAKQLNEDCSK----TQPCDHTKGLECNFGAS 83

  Fly   151 ISSGLGVCMDLQHLTALTYSQHDNCSDSDSIV-----LEPGCEITNKRCQC 196
            .::..|:|.        ..|:...|..:..|.     .:|.|:   .:|.|
Human    84 STALKGICR--------AQSEGRPCEYNSRIYQNGESFQPNCK---HQCTC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 21/56 (38%)
CCN1NP_001545.2 IGFBP 26..78 CDD:365955 22/58 (38%)
VWC 100..159 CDD:214564 6/27 (22%)
TSP1 232..272 CDD:214559
Heparin-binding. /evidence=ECO:0000250|UniProtKB:P18406 279..315
GHB_like 293..375 CDD:389804
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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