DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and Ccn5

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_113778.2 Gene:Ccn5 / 29576 RGDID:621867 Length:250 Species:Rattus norvegicus


Alignment Length:148 Identity:34/148 - (22%)
Similarity:45/148 - (30%) Gaps:61/148 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PDCPGKGLMLWDPCKCCRICAKTLGESC-----------------GGPGGFSGQCEPPLQCVTKL 149
            |.||....::.|.|.||::||:.|||||                 .||||....|          
  Rat    37 PQCPQGVPLVLDGCGCCKVCARRLGESCDHLHVCDPSQGLVCQPGAGPGGHGAVC---------- 91

  Fly   150 PISSGLGVCMDLQHLTALTYSQHDNCSDS-----DSIVLEPGCEITNKRCQCWPTMRTCLSELTS 209
                             |......:|..:     |....:|.|.:.   |:|.....|||...:.
  Rat    92 -----------------LLDEDDGSCEVNGRRYLDGETFKPNCRVL---CRCDDGGFTCLPLCSE 136

  Fly   210 DGGSPDDSRWHFKNLEDC 227
            |...|.   |      ||
  Rat   137 DVRLPS---W------DC 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 19/59 (32%)
Ccn5NP_113778.2 IGFBP 26..78 CDD:395164 14/40 (35%)
VWC 100..159 CDD:327433 14/58 (24%)
TSP1_CCN 194..237 CDD:408805
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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