DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and Ccn4

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_061353.1 Gene:Ccn4 / 22402 MGIID:1197008 Length:367 Species:Mus musculus


Alignment Length:236 Identity:48/236 - (20%)
Similarity:74/236 - (31%) Gaps:104/236 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 YCN-PKECDVIRSPDCPGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCEP--PLQCVTKLPI 151
            :|. |.||.. ..|.||....::.|.|:||:|||:.||::|..    :..|:|  .|.|     .
Mouse    48 FCKWPCECPQ-SPPRCPLGVSLITDGCECCKICAQQLGDNCTE----AAICDPHRGLYC-----D 102

  Fly   152 SSG------LGVCMDLQH----LTALTYSQHD--------NCSDSDSIVLEPGC----------- 187
            .||      :|||..:..    |..:.|:..:        ||:..|..|   ||           
Mouse   103 YSGDRPRYAIGVCAQVVGVGCVLDGVRYTNGESFQPNCRYNCTCIDGTV---GCTPLCLSPRPPR 164

  Fly   188 ---------EITNKRCQCW-----------------------------------------PTMRT 202
                     .:..:.|:.|                                         |...|
Mouse   165 LWCRQPRHVRVPGQCCEQWVCDDDARRPRQTALLDTRAFAASGAVEQRYENCIAYTSPWSPCSTT 229

  Fly   203 C-------LSELTSDGGSPDDSRWHFKNLEDCQLNLQNLIK 236
            |       :|.:.:......:||  ..||..|.:::|..||
Mouse   230 CGLGISTRISNVNARCWPEQESR--LCNLRPCDVDIQLHIK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 20/56 (36%)
Ccn4NP_061353.1 IGFBP 49..101 CDD:278641 20/56 (36%)
VWC 123..181 CDD:214564 8/60 (13%)
TSP_1 220..259 CDD:301595 8/40 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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