DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and Ccn1

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_034646.1 Gene:Ccn1 / 16007 MGIID:88613 Length:379 Species:Mus musculus


Alignment Length:155 Identity:40/155 - (25%)
Similarity:61/155 - (39%) Gaps:41/155 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NGSYFGRLNVSALLIYLWCYLLLVMAASGGSNHVVNGLKCYCNPKECDVIRSPDC-PGKGLMLWD 113
            :.|.|..|.|:..|::|....|....|:           |:| |.|     :|.| ||.||:. |
Mouse     2 SSSTFRTLAVAVTLLHLTRLALSTCPAA-----------CHC-PLE-----APKCAPGVGLVR-D 48

  Fly   114 PCKCCRICAKTLGESCGGPGGFSGQCE--PPLQCVTKLPISSGLGVCMDLQHLTALTYSQHDNCS 176
            .|.||::|||.|.|.|..    :..|:  ..|:|......::..|:|.        ..|:...|.
Mouse    49 GCGCCKVCAKQLNEDCSK----TQPCDHTKGLECNFGASSTALKGICR--------AQSEGRPCE 101

  Fly   177 DSDSIV-----LEPGCEITNKRCQC 196
            .:..|.     .:|.|:   .:|.|
Mouse   102 YNSRIYQNGESFQPNCK---HQCTC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 21/56 (38%)
Ccn1NP_034646.1 IGFBP 26..78 CDD:365955 23/73 (32%)
VWC 100..159 CDD:214564 6/27 (22%)
TSP1 230..270 CDD:214559
Heparin-binding. /evidence=ECO:0000269|PubMed:10821835 277..313
Cys_knot 291..373 CDD:333760
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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