DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and ccn3

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002938019.1 Gene:ccn3 / 100494006 XenbaseID:XB-GENE-1013046 Length:344 Species:Xenopus tropicalis


Alignment Length:142 Identity:35/142 - (24%)
Similarity:52/142 - (36%) Gaps:44/142 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 CYLLLVMAASGGSNHVVNGLKCYCNPKECDVI--RSPDCPGKGLMLWDPCKCCRICAKTLGESCG 130
            |::||:..        |...:|   |.:||..  ..|.|.....::.|.|.||.:||:..|||| 
 Frog     8 CFILLLQQ--------VASQRC---PSQCDQCPEEPPSCAPSVPLVLDGCACCPVCARQEGESC- 60

  Fly   131 GPGGFSGQCEP-----PLQCVTKLPISSGLGVCMDLQHLTALTYSQHDNCSDSDSIV------LE 184
                  .:..|     .|.|.......:..|:||.|         :.:||. .|.:|      .:
 Frog    61 ------SEMHPCQEDKGLYCEFNADPRTEAGICMAL---------EGNNCI-FDGVVYRNRATFQ 109

  Fly   185 PGCEITNKRCQC 196
            |.|:.   .|.|
 Frog   110 PSCKY---HCTC 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 17/60 (28%)
ccn3XP_002938019.1 IGFBP 21..74 CDD:365955 18/62 (29%)
VWC 95..155 CDD:214564 7/28 (25%)
TSP1 193..234 CDD:214559
CT 253..322 CDD:214482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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