DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmpy and ccn6

DIOPT Version :9

Sequence 1:NP_001097652.1 Gene:cmpy / 40288 FlyBaseID:FBgn0037015 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002936979.3 Gene:ccn6 / 100488354 XenbaseID:XB-GENE-967531 Length:352 Species:Xenopus tropicalis


Alignment Length:199 Identity:46/199 - (23%)
Similarity:70/199 - (35%) Gaps:57/199 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KCYCN-PKECDVIRSPDCPGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCE----------- 140
            |.:|: |.:|.  ....||.....:.|.|.||:||||.|||||..    :..|:           
 Frog    45 KQFCHWPCKCS--HQSSCPPGMSRVKDGCGCCKICAKQLGESCNE----ADVCDHHRGLYCDYSA 103

  Fly   141 --PPLQCVTKLPISSGLGVCMDLQ----HLTALTYSQHDNCSDSDSIVLEPGCEITNKRCQCWPT 199
              |..:          :|:|..:.    .|..:.|........|...:    |...:....|.||
 Frog   104 DRPKYE----------VGICKYMLAVGCELNGVLYKNGQTFQPSPHYL----CLCISDTIGCTPT 154

  Fly   200 M--RTCLSELTSDGGSPDDSRWHFKNLEDCQLNLQNLIKLEQEFDEDYKISPSKFTYKKLRR--K 260
            :  :...::..:..|.|..|     :..:|.|.       :..:..|||.:|   .||.|..  |
 Frog   155 LVGKQDQNQCVTSPGQPKIS-----DNANCALE-------KDSYKPDYKFTP---VYKVLPLVWK 204

  Fly   261 RKSL 264
            ||.|
 Frog   205 RKCL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmpyNP_001097652.1 IGFBP 91..145 CDD:395164 20/67 (30%)
ccn6XP_002936979.3 IGFBP 48..99 CDD:395164 19/56 (34%)
TSP1_CCN 207..250 CDD:408805 1/2 (50%)
GHB_like 273..340 CDD:419725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X231
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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