DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kni and nr3c2

DIOPT Version :10

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001093873.1 Gene:nr3c2 / 562171 ZFINID:ZDB-GENE-060531-23 Length:970 Species:Danio rerio


Alignment Length:131 Identity:45/131 - (34%)
Similarity:61/131 - (46%) Gaps:19/131 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRS----YNNISTISECKNEGKCIIDKKNRTTCKACRL 68
            :.|.|||:.|:|.|:|..||..||.||.|:    :|.:     |.....|||||..|..|.|||:
Zfish   599 KVCLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYL-----CAGRNDCIIDKIRRKNCPACRV 658

  Fly    69 RKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKAPPLAGGVSVGGAPSASSPVGSPHT 133
            |||...||:.|    .|:|.  |:..:....|.::..:.|..|..    ......:||....|||
Zfish   659 RKCLQAGMNLG----ARKSK--KLGKIKSISEDSSLQSSKDGPFL----TSEKELSSSTALVPHT 713

  Fly   134 P 134
            |
Zfish   714 P 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:413390 35/87 (40%)
nr3c2NP_001093873.1 PHA03307 127..>340 CDD:223039
NR_DBD_GR_PR 597..674 CDD:143546 34/83 (41%)
NR_LBD_MR 723..970 CDD:132760
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.