DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kni and eg

DIOPT Version :9

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster


Alignment Length:423 Identity:151/423 - (35%)
Similarity:190/423 - (44%) Gaps:135/423 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRK 70
            |||.|||||||||||||||||||||||||||:||||:.|:.||:.|.|:|:|||||.||||||||
  Fly     1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRK 65

  Fly    71 CYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKAPPLAGGVSV-----GGAPSAS----- 125
            |..|||||.|||||||||||||||||||.:..:.       |.||.||     ||..|||     
  Fly    66 CLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSG-------LGGGSSVGSGSGGGVSSASLEQLA 123

  Fly   126 ----------------------------SP----------VGSPHTPGFGDMAAHLHHHHQQQQQ 152
                                        ||          :|...:|.| ..||.|||..|.:..
  Fly   124 RLQQASNQARQTYQDKTNPCIKSATATTSPRIEGAAVGTGIGGGASPSF-LQAAKLHHQRQLKLD 187

  Fly   153 QQVPRHPHMPLLGYPSYLSDPSAALP----FFSMMGG---VPHQ-SPFQLPP----HLLFPGYHA 205
            .:        |...||.....||..|    ..|::||   .|.. :...||.    |..||    
  Fly   188 SR--------LSNTPSDSGASSAGDPNEDGVTSVLGGQIATPSSTNATSLPKLDLRHPNFP---- 240

  Fly   206 SAAAAAASAADAAYRQEMYKHRQSVDSVESQNR-----FSPASQPPVVQPTSSARQSPIDVCLEE 265
                 |.|..||..:::  :|::.::...|.:.     |:|.|..|.|...:...|.||      
  Fly   241 -----ATSEPDADMQRQ--RHQELLEIFRSHSEPLYSSFAPFSHLPPVLLAAGVPQLPI------ 292

  Fly   266 DVHSVHSHQSSASLLHPIAIRATPTTPTSSSP--LSFAAKMQSLSPV---------------SVC 313
                 ...|..|.||.|     |.::|....|  |||.::....||:               |.|
  Fly   293 -----FKDQFKAELLFP-----TTSSPELEEPIDLSFRSRADPASPMAHNSNSPSLSEPAAASHC 347

  Fly   314 SIGGETTSVVPVHPPTVSAQEGPMDLSMKTSRS 346
            .  ||:|:.|        .:..|:||::..|::
  Fly   348 L--GESTNFV--------RKSTPLDLTLVRSQT 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:295381 68/83 (82%)
egNP_524206.1 NR_DBD_like 3..87 CDD:295381 68/83 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447452
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1136195at2759
OrthoFinder 1 1.000 - - FOG0009962
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.