DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kni and knrl

DIOPT Version :9

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001303368.1 Gene:knrl / 40285 FlyBaseID:FBgn0001323 Length:647 Species:Drosophila melanogaster


Alignment Length:614 Identity:186/614 - (30%)
Similarity:236/614 - (38%) Gaps:232/614 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRK 70
            |||||||||||||||||||||||||||||||||||:|:||:|||.|:|||:|||||.||||||:|
  Fly    10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKACRLKK 74

  Fly    71 CYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKA---PPLAGGVSVGGA----------- 121
            |..|||||.|||||||||||||||||||.:|.|.||..|   ...|||.|.||:           
  Fly    75 CLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAVAAMAAHHNSQQAGGGSSGGSGGGQGMPNGVK 139

  Fly   122 -------PSASSP----VGSP-HTPGF----------------------GDMAAHLHHH------ 146
                   |:|::.    :|.| ..||.                      |.:....|.|      
  Fly   140 GMSGVPPPAAAAAALGMLGHPGGYPGLYAVANAGGSSRSKEELMMLGLDGSVEYGSHKHPVVASP 204

  Fly   147 -------HQQQQQQQVPRHPHMPLL--------------------------------GYPSYL-S 171
                   |......:|......|||                                |.|..: .
  Fly   205 SVSSPDSHNSDSSVEVSSVRGNPLLHLGGKSNSGGSSSGADGSHSGGGGGGGGGVTPGRPPQMRK 269

  Fly   172 DPSAALPF-FSMMGGVPHQSP--FQLPPHLLFPGYHAS----------------AAAAAASAADA 217
            |.|..||. |..:..:|...|  |..|.||||||||.:                .||.||:|.  
  Fly   270 DLSPFLPLPFPGLASMPVMPPPAFLPPSHLLFPGYHPALYSHHQGLLKPTPEQQQAAVAAAAV-- 332

  Fly   218 AYRQEMYKHRQSVDSVESQNRFSPASQP---------------PVVQPTSSARQSP--------- 258
               |.::      :|..:..||:|.:.|               |...|::.|..:.         
  Fly   333 ---QHLF------NSSGAGQRFAPGTSPFANHQQHHKEEDQPAPARSPSTHANNNHLLTNGGAAD 388

  Fly   259 -------IDVCLEEDVHS--------VHSHQS-SASLLHPIAIRATPTTPTSSSPLSFAAKMQSL 307
                   :|..|:....|        .||.|. |.|.|         .||.|.|........|:.
  Fly   389 ELTKRFYLDAVLKSQQQSPPPTTKLPPHSKQDYSISAL---------VTPNSESGRERVKSRQNE 444

  Fly   308 SPVSVCSIG------------GETTSVVPVHPPTVS--------------AQEGPMDLSMKTSRS 346
            ......:.|            ....|:.|.|.|...              .|:.|:||||||:.|
  Fly   445 EDDEARADGIIDGAEHDDEEEDLVVSMTPPHSPAQQEERTPAGEDPRPSPGQDNPIDLSMKTTGS 509

  Fly   347 SVHS------------------FNDSGSEDQEVEVAPRRKFYQLEAECLTTSSSSSSHSAAHSPN 393
            |:.|                  .||:..:|::::|.|       |.|.....::.......||..
  Fly   510 SLSSKSSSPEIEPETEISSDVEKNDTDDDDEDLKVTP-------EEEISVRETADPEIEEDHSST 567

  Fly   394 TTTAHAEVKRQKLGGAEATHFGGFAVAHN 422
            |.||...:        |.||....::::|
  Fly   568 TETAKTSI--------ENTHNNNNSISNN 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:295381 72/83 (87%)
knrlNP_001303368.1 NR_DBD_like 12..96 CDD:295381 72/83 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1136195at2759
OrthoFinder 1 1.000 - - FOG0009962
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.000

Return to query results.
Submit another query.