Protein Alignment kni and knrl

DIOPT Version :10

• Sequence 1: NP_001287130.1
• Gene: kni / 40287
• FlyBaseID: FBgn0001320
• Length: 434
• Species: Drosophila melanogaster
• Sequence 2: NP_788552.1
• Gene: knrl / 40285
• FlyBaseID: FBgn0001323
• Length: 647
• Species: Drosophila melanogaster
• Alignment Length: 614
• Identity: 186/614 - (30%)
• Similarity: 236/614 - (38%)
• Gaps: 232/614 - (37%)

  Fly     6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRK 70
            |||||||||||||||||||||||||||||||||||:|:||:|||.|:|||:|||||.||||||:|
  Fly    10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKACRLKK 74

  Fly    71 CYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKA---PPLAGGVSVGGA----------- 121
            |..|||||.|||||||||||||||||||.:|.|.||..|   ...|||.|.||:
  Fly    75 CLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAVAAMAAHHNSQQAGGGSSGGSGGGQGMPNGVK 139

  Fly   122 -------PSASSP----VGSP-HTPGF----------------------GDMAAHLHHH------ 146
                   |:|::.    :|.| ..||.                      |.:....|.|
  Fly   140 GMSGVPPPAAAAAALGMLGHPGGYPGLYAVANAGGSSRSKEELMMLGLDGSVEYGSHKHPVVASP 204

  Fly   147 -------HQQQQQQQVPRHPHMPLL--------------------------------GYPSYL-S 171
                   |......:|......|||                                |.|..: .
  Fly   205 SVSSPDSHNSDSSVEVSSVRGNPLLHLGGKSNSGGSSSGADGSHSGGGGGGGGGVTPGRPPQMRK 269

  Fly   172 DPSAALPF-FSMMGGVPHQSP--FQLPPHLLFPGYHAS----------------AAAAAASAADA 217
            |.|..||. |..:..:|...|  |..|.||||||||.:                .||.||:|.
  Fly   270 DLSPFLPLPFPGLASMPVMPPPAFLPPSHLLFPGYHPALYSHHQGLLKPTPEQQQAAVAAAAV-- 332

  Fly   218 AYRQEMYKHRQSVDSVESQNRFSPASQP---------------PVVQPTSSARQSP--------- 258
               |.::      :|..:..||:|.:.|               |...|::.|..:.
  Fly   333 ---QHLF------NSSGAGQRFAPGTSPFANHQQHHKEEDQPAPARSPSTHANNNHLLTNGGAAD 388

  Fly   259 -------IDVCLEEDVHS--------VHSHQS-SASLLHPIAIRATPTTPTSSSPLSFAAKMQSL 307
                   :|..|:....|        .||.|. |.|.|         .||.|.|........|:.
  Fly   389 ELTKRFYLDAVLKSQQQSPPPTTKLPPHSKQDYSISAL---------VTPNSESGRERVKSRQNE 444

  Fly   308 SPVSVCSIG------------GETTSVVPVHPPTVS--------------AQEGPMDLSMKTSRS 346
            ......:.|            ....|:.|.|.|...              .|:.|:||||||:.|
  Fly   445 EDDEARADGIIDGAEHDDEEEDLVVSMTPPHSPAQQEERTPAGEDPRPSPGQDNPIDLSMKTTGS 509

  Fly   347 SVHS------------------FNDSGSEDQEVEVAPRRKFYQLEAECLTTSSSSSSHSAAHSPN 393
            |:.|                  .||:..:|::::|.|       |.|.....::.......||..
  Fly   510 SLSSKSSSPEIEPETEISSDVEKNDTDDDDEDLKVTP-------EEEISVRETADPEIEEDHSST 567

  Fly   394 TTTAHAEVKRQKLGGAEATHFGGFAVAHN 422
            |.||...:        |.||....::::|
  Fly   568 TETAKTSI--------ENTHNNNNSISNN 588

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
kni	NP_001287130.1	NR_DBD_like	8..92	CDD:413390	72/83 (87%)
knrl	NP_788552.1	NR_DBD_like	12..96	CDD:413390	72/83 (87%)