DRSC/TRiP Functional Genomics Resources

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Protein Alignment kni and nhr-265

DIOPT Version :10

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_493092.1 Gene:nhr-265 / 185603 WormBaseID:WBGene00009608 Length:348 Species:Caenorhabditis elegans


Alignment Length:117 Identity:37/117 - (31%)
Similarity:49/117 - (41%) Gaps:15/117 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CKVCGEPAA--GFHFGAFTCEGCKSFFGRSYN-NISTISECKNEGKCI-IDKKNRTTCKACRLRK 70
            |.||..|.:  ..|||...|..|.|||.|:.: ||..:  ||.:..|. |.||....|:|||..|
 Worm    10 CPVCSLPCSMRYSHFGGICCPACASFFRRTVSLNIRYL--CKKQNNCSGISKKYHIVCRACRYEK 72

  Fly    71 CY-NVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAG--------KAPPLA 113
            |. ..||.:...::.:.......:.||.|........|        ||.|:|
 Worm    73 CIKKAGMKRSLVQHKQSDKNVPKYILLNEDRDVEFVRGFTTSSPVLKASPVA 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:413390 29/86 (34%)
nhr-265NP_493092.1 ZnF_C4 10..82 CDD:197701 29/73 (40%)
HOLI 173..335 CDD:214658
Blue background indicates that the domain is not in the aligned region.

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