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Protein Alignment kni and nhr-59
DIOPT Version :9
Sequence 1: | NP_001287130.1 |
Gene: | kni / 40287 |
FlyBaseID: | FBgn0001320 |
Length: | 434 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_503624.2 |
Gene: | nhr-59 / 178707 |
WormBaseID: | WBGene00003649 |
Length: | 416 |
Species: | Caenorhabditis elegans |
Alignment Length: | 172 |
Identity: | 50/172 - (29%) |
Similarity: | 76/172 - (44%) |
Gaps: | 43/172 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LMNQT-CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKN-EGKCIIDKKNRTTCKACR 67
::||| |:|||:.:.|.||||.||..|.:||.|.....:...:||: .|:|.|....|:.||.||
Worm 14 VVNQTFCQVCGQESHGAHFGAITCRACAAFFRRVAAGANFEVKCKDGRGRCKILTNGRSCCKKCR 78
Fly 68 LRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKAPPLAGGVSVGGAPSASSPVGSPH 132
|:||.::||.....::.|.| .|....| |||.|:.:|.|.
Worm 79 LKKCKDIGMDIQNFQFNRDS------------------------FATSTKV--APSLSTFLGRPE 117
Fly 133 -----TPG---------FGDMAAHLHHHHQ-QQQQQQVPRHP 159
:|| |.|::..:.:..| ....:::|..|
Worm 118 FLLSCSPGTSASTSQNKFIDLSPFIKNCKQVLMDDRKIPLAP 159
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1136195at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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