DRSC/TRiP Functional Genomics Resources

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Protein Alignment kni and ar

DIOPT Version :10

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:XP_002941888.3 Gene:ar / 100489816 XenbaseID:XB-GENE-479429 Length:788 Species:Xenopus tropicalis


Alignment Length:129 Identity:44/129 - (34%)
Similarity:61/129 - (47%) Gaps:17/129 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCY 72
            :||.:||:.|:|.|:||.||..||.||.|:........ |.:...|.|||..|..|.:|||||||
 Frog   425 KTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYL-CASRNDCTIDKFRRKNCPSCRLRKCY 488

  Fly    73 NVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKAPPLAGGVSVGGAPSASSPVGSPHTPGF 136
            ..||:.|..:..:..|       |:..|:.     :..|:.|..|...||.    :|.|...|:
 Frog   489 EAGMTLGARKLKKLGN-------LKAQEEL-----EGSPVQGEGSKDLAPG----MGIPQLEGY 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:413390 34/83 (41%)
arXP_002941888.3 Androgen_recep 6..372 CDD:426632
NR_DBD_AR 422..503 CDD:143547 33/78 (42%)
NR_LBD_AR 541..786 CDD:132758
Blue background indicates that the domain is not in the aligned region.

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