DRSC/TRiP Functional Genomics Resources

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Protein Alignment kni and esrrgr

DIOPT Version :10

Sequence 1:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster
Sequence 2:XP_002938860.2 Gene:esrrgr / 100488364 XenbaseID:XB-GENE-5997544 Length:451 Species:Xenopus tropicalis


Alignment Length:77 Identity:37/77 - (48%)
Similarity:47/77 - (61%) Gaps:3/77 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CKVCGEPAAGFHFGAFTCEGCKSFFGRS-YNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYN 73
            |.|||:.|:|:|:|..:||.||:||.|: ..||.  ..|.....|.|.|:.|.:|:|||.|||.|
 Frog   118 CLVCGDTASGYHYGVASCEACKAFFKRTIQGNIE--YSCPVVNDCEITKRRRKSCQACRFRKCLN 180

  Fly    74 VGMSKGGSRYGR 85
            |||.|.|.|..|
 Frog   181 VGMMKEGVRLDR 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kniNP_001287130.1 NR_DBD_like 8..92 CDD:413390 37/77 (48%)
esrrgrXP_002938860.2 NR_DBD_ERR 112..207 CDD:143544 37/77 (48%)
NR_LBD 230..449 CDD:472173
Blue background indicates that the domain is not in the aligned region.

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