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Protein Alignment knrl and nhr-207
DIOPT Version :9
Sequence 1: | NP_001303368.1 |
Gene: | knrl / 40285 |
FlyBaseID: | FBgn0001323 |
Length: | 647 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_506035.1 |
Gene: | nhr-207 / 187661 |
WormBaseID: | WBGene00011098 |
Length: | 406 |
Species: | Caenorhabditis elegans |
Alignment Length: | 103 |
Identity: | 30/103 - (29%) |
Similarity: | 53/103 - (51%) |
Gaps: | 9/103 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECI----INKKNRTACKACRLKK 74
|::|..||.|:|:...:|.|||:||.|:... ..:.:||...:|: |.|.....|.:||..|
Worm 36 CRICRNPAVGYHYDVASCNGCKAFFRRTVIT-GRLPNCKFGDKCLEDHKIPKPGTRLCGSCRFSK 99
Fly 75 CLMVGMSKSGSR---YGRRSNWFKIHCLLQEQQQQAVA 109
|..:||:....: ..::.|..|:. |:::..:|.:|
Worm 100 CEQMGMNPMAIKSEIISKKGNILKME-LVKKHNRQLIA 136
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
knrl | NP_001303368.1 |
NR_DBD_like |
12..96 |
CDD:295381 |
26/88 (30%) |
nhr-207 | NP_506035.1 |
ZnF_C4 |
36..107 |
CDD:197701 |
25/71 (35%) |
HOLI |
212..374 |
CDD:214658 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2AR2M |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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