DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13250 and CG13198

DIOPT Version :9

Sequence 1:NP_649245.1 Gene:CG13250 / 40284 FlyBaseID:FBgn0037013 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_610690.1 Gene:CG13198 / 36245 FlyBaseID:FBgn0033640 Length:180 Species:Drosophila melanogaster


Alignment Length:156 Identity:40/156 - (25%)
Similarity:66/156 - (42%) Gaps:35/156 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LCCLVVPILWQPSLATRDFDIRWRDINCSVIDPTTAEIFK---CDI-------VEMPKKQGNFLN 67
            |..|.:.:|.|.|:.||  .:::.::.|..: ||:..:.|   |.:       ||:..|...|. 
  Fly     7 LYLLFLSVLLQDSMGTR--LLKFTNVKCMDL-PTSRGLTKYEYCHLKVVRRNQVELSLKVSLFQ- 67

  Fly    68 TFLLLRRSVTKMWVELSVGQIANRKD--RPVQQLFKIRVDGCHLIEFR----SKSRILNAVLHKL 126
              |.:|...|::       |...|:|  ||.  ::.|..|.|.|:..|    |..|.:...:.| 
  Fly    68 --LPIRNLTTRL-------QCFQRRDGYRPF--MYYILFDFCKLMASRNYDLSFERFIFDAIRK- 120

  Fly   127 LQSGNYPDACPLLANVNYTSTRFALN 152
              ..|:...||...| :.|..:|||:
  Fly   121 --QSNFNQTCPWKEN-HMTVEKFALD 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13250NP_649245.1 DM8 95..181 CDD:214778 17/62 (27%)
CG13198NP_610690.1 DM8 86..179 CDD:214778 18/64 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472656
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR20898
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.