DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcd2 and LOC1270858

DIOPT Version :10

Sequence 1:NP_649244.3 Gene:Rcd2 / 40283 FlyBaseID:FBgn0037012 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_061508994.1 Gene:LOC1270858 / 1270858 VectorBaseID:AGAMI1_008207 Length:456 Species:Anopheles gambiae


Alignment Length:153 Identity:38/153 - (24%)
Similarity:52/153 - (33%) Gaps:56/153 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ESLACP-----PCENDFPICYK-----VIVEVERGNGLPGSCCPRYECLDEEPVCDGSKRRFYKN 83
            :.|.||     ||... |:|..     ::.:.|..:|.||:|||...|                 
Mosquito   182 QQLCCPRCTCLPCPEQ-PVCPPDTKPLIVDQQELQHGQPGNCCPAVHC----------------- 228

  Fly    84 KCTVCDPCEPLAIQCKEICPMEEPEPI-CLSDNN--EYHRNGDIWMENNGCTTCMCEGGYVTRNA 145
                                  :|||: |.|..:  .|..|. .|.| :.||.|.||.|......
Mosquito   229 ----------------------QPEPVMCFSSTHRTSYPTNA-TWQE-DACTVCRCEAGEPKCQT 269

  Fly   146 VQCNHYYRCNNPVEVKGQCCPVC 168
            ..|.. ..|.:.:|:...|||||
Mosquito   270 SLCKP-LNCEHKLELPNVCCPVC 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcd2NP_649244.3 VWC 114..168 CDD:214564 16/55 (29%)
LOC1270858XP_061508994.1 None

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