DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4858 and HCF101

DIOPT Version :9

Sequence 1:NP_649243.1 Gene:CG4858 / 40282 FlyBaseID:FBgn0037011 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_189086.1 Gene:HCF101 / 822033 AraportID:AT3G24430 Length:532 Species:Arabidopsis thaliana


Alignment Length:247 Identity:88/247 - (35%)
Similarity:123/247 - (49%) Gaps:23/247 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDD 66
            |.::.|:|.|.|.|||||||||:..|:..|...|.:||:.|.|:.|||:|.::..|.| |.:.:.
plant   172 LSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVNPESR-ILEMNP 235

  Fly    67 GWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSD 131
            ....:...|...:.::|.||..:.|   .|.|||..:.:|.|.||...|.|||||:||.||||.|
plant   236 EKKTIIPTEYMGVKLVSFGFAGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 297

  Fly   132 EHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGF------VCPH 190
            ..:|:.:.   .....|:||||||::|..||.|.:....|..:..:.:||||..|      ..| 
plant   298 IQLTLCQV---APLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYP- 358

  Fly   191 CTSCTNIFSSNGGVSLATYAQVPHLGTLPIDPRVGIL--AGTTTSVLDELPD 240
                   |....|..:.....:|||..|||.|.:...  :||...|.|.|.|
plant   359 -------FGKGSGSEVVKQFGIPHLFDLPIRPTLSASGDSGTPEVVSDPLSD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4858NP_649243.1 ParA 4..254 CDD:287566 87/245 (36%)
minD_arch 8..254 CDD:131024 86/241 (36%)
HCF101NP_189086.1 FeS_assembly_P 76..160 CDD:412662
ParA 174..411 CDD:402307 87/245 (36%)
DUF971 <448..515 CDD:412889
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100169
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.680

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