DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4858 and nubp2

DIOPT Version :9

Sequence 1:NP_649243.1 Gene:CG4858 / 40282 FlyBaseID:FBgn0037011 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001032191.2 Gene:nubp2 / 641290 ZFINID:ZDB-GENE-051023-10 Length:269 Species:Danio rerio


Alignment Length:259 Identity:144/259 - (55%)
Similarity:189/259 - (72%) Gaps:2/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDD 66
            ||:||:|::||||||||||||::|:|:||.|..|.|||:||:||||||:|.:|.:...::.|||.
Zfish     9 LDQVKHVLLVLSGKGGVGKSTITTELALAFRHAGKKVGILDVDLCGPSIPRMLSVGKPEVHQCDS 73

  Fly    67 GWVPVYTD--ESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGT 129
            ||||||.|  :.|.||:|||.|||::.::.|||||||||.:|.||::||.|.|||.|::||||||
Zfish    74 GWVPVYADPQQQQQLALMSIAFLLEDSDEAVIWRGPKKTALIGQFVSDVAWGELDILLVDTPPGT 138

  Fly   130 SDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSC 194
            ||||:.|:|.|::....||::|||||.|:..|||:||||||||.:.||||||||||||||||:.|
Zfish   139 SDEHLAVLENLRKHRVDGAVLVTTPQAVSTGDVRREITFCKKTNLKILGIVENMSGFVCPHCSEC 203

  Fly   195 TNIFSSNGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAEVLTHIVEKLKTML 258
            :||||..||..||.......||::|:||.:..........|...|:|:|...::||...|...|
Zfish   204 SNIFSKGGGEELAKLTGSAFLGSVPLDPLLTESLEEGRDFLQAFPESSTFTAISHIANTLLNSL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4858NP_649243.1 ParA 4..254 CDD:287566 140/251 (56%)
minD_arch 8..254 CDD:131024 138/247 (56%)
nubp2NP_001032191.2 ParA 11..264 CDD:287566 140/252 (56%)
minD_arch 15..263 CDD:131024 138/247 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585918
Domainoid 1 1.000 296 1.000 Domainoid score I1452
eggNOG 1 0.900 - - E1_COG0489
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8057
Inparanoid 1 1.050 300 1.000 Inparanoid score I2670
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 1 1.000 - - FOG0001227
OrthoInspector 1 1.000 - - oto38975
orthoMCL 1 0.900 - - OOG6_100169
Panther 1 1.100 - - LDO PTHR23264
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R189
SonicParanoid 1 1.000 - - X4074
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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