DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4858 and nubp1

DIOPT Version :9

Sequence 1:NP_649243.1 Gene:CG4858 / 40282 FlyBaseID:FBgn0037011 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001015835.1 Gene:nubp1 / 548552 XenbaseID:XB-GENE-992726 Length:320 Species:Xenopus tropicalis


Alignment Length:257 Identity:134/257 - (52%)
Similarity:178/257 - (69%) Gaps:5/257 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFK-VGLLDIDLCGPSVPYLLGLEGRDIFQCD 65
            |..||:.|:||||||||||||.|..|:..|.::..| |.|||:|:||||:|.::||||..:.|..
 Frog    54 LSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMMGLEGEQVHQSG 118

  Fly    66 DGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTS 130
            .||.|||.:::  |||||:||||.:.:|.||||||||..||:|||.||.|.|:||||||||||||
 Frog   119 SGWSPVYVEDN--LAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIIDTPPGTS 181

  Fly   131 DEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSCT 195
            |||::|::.|...|..||:|:||||||:|.||||||.||.|..:.|:|:|||||||:||.|.:.:
 Frog   182 DEHLSVVQYLSVAGIDGAVIITTPQEVSLQDVRKEINFCHKVKLPIIGVVENMSGFICPKCKNES 246

  Fly   196 NIF--SSNGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAEVLTHIVEKLK 255
            .||  ::.|...:.|...|..||.:|:||.:|....|..|...|:|||........|:::::
 Frog   247 QIFPPTTGGAEKMCTDLNVSLLGKVPLDPNIGKSCDTGKSFFSEIPDSPATLSYRTIIQRIQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4858NP_649243.1 ParA 4..254 CDD:287566 133/252 (53%)
minD_arch 8..254 CDD:131024 131/248 (53%)
nubp1NP_001015835.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
ParA 57..307 CDD:313763 133/251 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 1 1.000 - - FOG0001227
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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