DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4858 and nubpl

DIOPT Version :9

Sequence 1:NP_649243.1 Gene:CG4858 / 40282 FlyBaseID:FBgn0037011 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001002442.1 Gene:nubpl / 436715 ZFINID:ZDB-GENE-040718-140 Length:327 Species:Danio rerio


Alignment Length:270 Identity:105/270 - (38%)
Similarity:144/270 - (53%) Gaps:35/270 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VKNVIVVLSGKGGVGKSTVSTQLSLALRKN--GFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDDG 67
            ||.||||.||||||||||.:..|:|.|..|  ...|||||.|:.|||||.|:.|:|.        
Zfish    74 VKEVIVVASGKGGVGKSTTAVNLALGLMANEQSKLVGLLDADVFGPSVPKLMNLKGN-------- 130

  Fly    68 WVPVYTDESQT-------LAVMSIGFLLKNRED--PVIWRGPKKTMMIRQFLTDVRWDELDYLII 123
              |..|:::..       :..||||||:   ||  |::|||......|.:.:..|.|..||||:|
Zfish   131 --PELTEKNLMRPLVNFGIPCMSIGFLV---EDVAPIVWRGLMVMSAIEKLIRQVDWGNLDYLVI 190

  Fly   124 DTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVC 188
            |.||||.|..:::.:   .:...||:||:|||::||.|.|:.....:|..:.:||:|:|||.|.|
Zfish   191 DMPPGTGDVQLSITQ---NIPIAGAVIVSTPQDIALMDARRGAEMFRKVNVPVLGLVQNMSVFQC 252

  Fly   189 PHCTSCTNIFSSNGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAE-------- 245
            |.|...|:||.|:|...||....|..||.:|:...:...:.....|:...|||..||        
Zfish   253 PKCNHQTHIFGSDGAKELAQTLGVELLGDIPLHLNIRETSDMGQPVVVSSPDSPEAEAYRRIAAA 317

  Fly   246 VLTHIVEKLK 255
            |:..:.|.||
Zfish   318 VVRRLAEHLK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4858NP_649243.1 ParA 4..254 CDD:287566 103/267 (39%)
minD_arch 8..254 CDD:131024 101/264 (38%)
nubplNP_001002442.1 ParA 73..319 CDD:287566 101/260 (39%)
minD_arch 77..319 CDD:131024 99/257 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100169
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.830

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