DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)77CDf and PSS1

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001077540.1 Gene:PSS1 / 838074 AraportID:AT1G15110 Length:453 Species:Arabidopsis thaliana


Alignment Length:388 Identity:137/388 - (35%)
Similarity:206/388 - (53%) Gaps:34/388 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GARRKRKDEIAQTFVIVNERPVD-DISLD----FFYKPHTITLLAVSVLAVMYFAFVRNE----- 116
            |.|::|:.|  |....:|....| :..||    :.|||.||:||.:....:::.:...:.     
plant     5 GYRKERRKE--QHLGRMNGGGGDVETDLDPWTAWAYKPRTISLLLIGACFLIWASGALDPDSTTS 67

  Fly   117 ----ANVDENLWAGLLCIVFFFLIVSVIAFPNGPFTRPHPAVWRILFGCSVLYLLTLQFLMFQNY 177
                .:|...:||    ::..||..|::..|:....|||||:||::.|.:|:||:.|.||:||..
plant    68 DDLVTSVKRGVWA----MIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMAVIYLVALTFLLFQRR 128

  Fly   178 PTIRSIFYWIDPKLKNFHIDM-EKEYGVNC----SDISWDRVKGHLDV----FAWGHFLGWAFKA 233
            ...|....::.|.|   .|:: ||.||.:|    .|...:|.|...|.    |...|..||..||
plant   129 DDARQFMKFLHPDL---GIELPEKSYGADCRIYVPDHPTNRFKNLYDTVFDEFFLAHIFGWWGKA 190

  Fly   234 ILIRHMGILWAISVMWEITEITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREY 298
            ||||:..:||.:|:.:|:.|:||.|:||||.|||||:::||::|||..|||.|:...:..:.:.|
plant   191 ILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDILICNWFGIWAGMYTVRYFDGKTY 255

  Fly   299 KWASIKDISTTTGKIKRAMLQFTPESWSAIRWLDPKSTAMRFAAVIQLVIFWQVTELNTFFLKHI 363
            :|..|.......||:||.:.||||..|....| .|.....||..|:.|.|.:...||||||||..
plant   256 EWVGISRQPNIIGKVKRTLGQFTPAHWDKDEW-HPLQGPWRFIQVLTLCIIFLTVELNTFFLKFS 319

  Fly   364 FEMPPDHFIVIGRLIFIGLFVAPSVRQYYVYVTDTR-CKRVGTQCWVYGAIMVSEAILCIKNG 425
            ..:||.:.:::.|||...|...|:.|:|..|:.|.: .|:||..||:...|.:.|.::|||.|
plant   320 LWIPPRNPVILYRLILWWLIAIPTTREYNSYLQDRKPVKKVGAFCWLSLGICIVELLICIKFG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 112/284 (39%)
PSS1NP_001077540.1 PLN02930 37..384 CDD:178518 128/354 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 217 1.000 Domainoid score I741
eggNOG 1 0.900 - - E1_KOG2735
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 238 1.000 Inparanoid score I1096
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818196at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto3360
orthoMCL 1 0.900 - - OOG6_101724
Panther 1 1.100 - - O PTHR15362
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.830

Return to query results.
Submit another query.