DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)77CDf and ptdss2

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001072672.1 Gene:ptdss2 / 780129 XenbaseID:XB-GENE-988429 Length:474 Species:Xenopus tropicalis


Alignment Length:411 Identity:141/411 - (34%)
Similarity:215/411 - (52%) Gaps:39/411 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RRKRKDEIAQTFVIVNERPVDDISLDFFYKPHTITLLAVSVLAVMYFAFVRNEANVDE--NLWAG 126
            ||..:.|:           .||.:..||::.||:|:|.:...::.|...: .|...|.  |...|
 Frog    44 RRSTESEV-----------FDDGTNTFFWRAHTLTVLFILTCSLGYVTLL-EETPQDTAYNAKRG 96

  Fly   127 LLCIVFFFLIVSVIAFPNGPFTRPHPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPKL 191
            ::..:..||...|....:|||:|||||.||.....||:|.|.|.|::||.....|....:|||||
 Frog    97 IIASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILFQTVHDGRQFMKFIDPKL 161

  Fly   192 KNFHIDM-EKEYGVNCSDIS-----------WDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWA 244
               .:.: |::||.||....           ||::.|    |...|||||..|.::||...:...
 Frog   162 ---GVPLPERDYGGNCLIYDPGNKTDPYHNLWDKMDG----FVPAHFLGWYIKTLMIRDWWMCMI 219

  Fly   245 ISVMWEITEITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTT 309
            ||||:|..|.:..|.||||.|||||..|:||::|||.||:.|:|..:.|.|:.|||..:.:|.|.
 Frog   220 ISVMFEFLEYSLEHQLPNFSECWWDHWIMDVLVCNGFGIYCGMKTLEWLSMKPYKWQGLWNIPTY 284

  Fly   310 TGKIKRAMLQFTPESWSAIRWLDPKSTAMRFAAVIQLVIFWQVTELNTFFLKHIFEMPPDHFIVI 374
            .||:||...||||.||....| .|.|:..|:.||..::..:.:.|||||:||.:..|||:|::|:
 Frog   285 RGKMKRIAFQFTPYSWVKFEW-KPASSLRRWLAVCGIIFVFLLAELNTFYLKFVLWMPPEHYLVL 348

  Fly   375 GRLIFIGLFVAPSVRQYYVYVTDTRC-KRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIV 438
            .||:|.......::|:.|.::.|.:. |::|.|.|:..||.|:|.::.:|..    ..|..:.:.
 Frog   349 LRLVFFVNVGGVAMREIYDFMDDLKFHKKLGQQAWMVAAITVTEFLIVVKYD----PYTITLPLP 409

  Fly   439 LWLTVQVIISVAFVYLAVYWQ 459
            .::|...|:.:..|.....|:
 Frog   410 FYVTQCWILGIVLVLTWTVWR 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 113/287 (39%)
ptdss2NP_001072672.1 PSS 120..399 CDD:367307 112/286 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..474
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370266at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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