DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)77CDf and ptdss1b

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_687872.5 Gene:ptdss1b / 559442 ZFINID:ZDB-GENE-081031-18 Length:464 Species:Danio rerio


Alignment Length:444 Identity:234/444 - (52%)
Similarity:318/444 - (71%) Gaps:17/444 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SAGARRKRKDEIAQT--FVIVNERPVDDISLDFFYKPHTITLLAVSVLAVMYFAFVRNEANVDEN 122
            |.|:|...||:....  |.::||:.|:||::||||||||||||..:|:::|||||.|::.:.|:|
Zfish     4 SQGSRMLSKDDADYKLHFRMINEQQVEDITIDFFYKPHTITLLTFTVVSIMYFAFTRDDGDSDKN 68

  Fly   123 LWAGLLCIVFFFLIVSVIAFPNGPFTRPHPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWI 187
            |..|||.:|.|||::||:||||||||||||:|||::||.||||.|.|.||:|.|:..::::.||:
Zfish    69 LRVGLLLVVSFFLVISVLAFPNGPFTRPHPSVWRMVFGLSVLYFLFLVFLIFLNWDQVKALLYWL 133

  Fly   188 DPKLKNFHIDME-KEYGVNCSDISWDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWEI 251
            ||.|:....:.: .||.|||..|:|:|:..|.|:||.|||.|||.||:|||..|:.|.||:.||:
Zfish   134 DPNLRYAKREADVMEYAVNCHVITWERILSHFDIFALGHFWGWAMKALLIRSYGLCWTISITWEL 198

  Fly   252 TEITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTTTGKIKRA 316
            ||:.|.||||||.|||||.:|||:::|||.|||:|:.:|:.||||.|:|||||||.:|:||:|||
Zfish   199 TELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMTVCRFLEMRTYRWASIKDIHSTSGKLKRA 263

  Fly   317 MLQFTPESWSAIRWLDPKSTAMRFAAVIQLVIFWQVTELNTFFLKHIFEMPPDHFIVIGRLIFIG 381
            :|||||.||:.:||.||||:..|.|.:...:|.||:||||||||||||.....|.:...|::|||
Zfish   264 VLQFTPASWTYVRWFDPKSSFQRVAGIYLFMIVWQLTELNTFFLKHIFVFQASHPLSWCRILFIG 328

  Fly   382 LFVAPSVRQYYVYVTDTRCKRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVI 446
            :..||:|||||.|||||:||||||||||:|||...||:.|||.|.:||..|||:.:|.||.....
Zfish   329 IITAPTVRQYYAYVTDTQCKRVGTQCWVFGAIAFLEALACIKFGHDLFSNTQALYVVFWLLCLAF 393

  Fly   447 ISVAFVYLAVYWQQ---RQLKKV-----------SSTPAKTKETIPASSSSPSK 486
            |:...:|..|:::|   ::||::           .|.|...||...:|:||.|:
Zfish   394 ITFLCLYGMVWYEQNYGKKLKRIPDDDGTSTDPYDSLPEAAKERSSSSNSSSSR 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 160/275 (58%)
ptdss1bXP_687872.5 PSS 96..372 CDD:281084 160/275 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589784
Domainoid 1 1.000 371 1.000 Domainoid score I854
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7494
Inparanoid 1 1.050 505 1.000 Inparanoid score I1306
OMA 1 1.010 - - QHG45692
OrthoDB 1 1.010 - - D370266at33208
OrthoFinder 1 1.000 - - FOG0004865
OrthoInspector 1 1.000 - - otm24423
orthoMCL 1 0.900 - - OOG6_101724
Panther 1 1.100 - - LDO PTHR15362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3988
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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