DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)77CDf and pssy-1

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_509673.1 Gene:pssy-1 / 181211 WormBaseID:WBGene00013920 Length:507 Species:Caenorhabditis elegans


Alignment Length:465 Identity:216/465 - (46%)
Similarity:289/465 - (62%) Gaps:24/465 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KKRTNSRGTPTSSGDALLDTSFSSAGDAERDHPAYKSGAASAPATPTKRRDGSDGSVSSAGARRK 66
            :||.|...........|||   ...|||               |..|:....||........|.|
 Worm    15 RKRKNRSNNEQPEEMHLLD---DRVGDA---------------AATTEAEADSDDESEKRVRRNK 61

  Fly    67 RKDEIAQT-FVIVNERPVDDISLDFFYKPHTITLLAVSVLAVMYFAFV--RNEAN-VDENLWAGL 127
            .:.::..| |.:||||.|:||::||.|||||:|:|.:.|:.:.|.||.  ..||| .|.|::.||
 Worm    62 SRRQLESTHFQMVNERVVEDITVDFLYKPHTLTILGLLVVFISYKAFTGFTEEANATDRNVYDGL 126

  Fly   128 LCIVFFFLIVSVIAFPNGPFTRPHPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPK-L 191
            |..:..||:||.:|||||||.||||..|||:||.||:||:.|||.:||.|..|:::..|:||| |
 Worm   127 LGTLALFLVVSALAFPNGPFIRPHPVFWRIVFGVSVVYLMLLQFTLFQTYTDIKTVLTWLDPKGL 191

  Fly   192 KNFHIDMEKEYGVNCSDISWDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWEITEITF 256
            .|..: :||||.:||||:|.:|:..|:|:||.|||.|||.||:||||..:.|.||:.||:|||.|
 Worm   192 GNEDL-VEKEYAINCSDVSLERLWSHMDIFAVGHFTGWAMKALLIRHGVLCWYISIAWELTEIVF 255

  Fly   257 AHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTTTGKIKRAMLQFT 321
            ..|||||.||||||:||||:|||||||:.||:||:.|.||.:.|.|||.|.|..|:.||.::|||
 Worm   256 TQLLPNFAECWWDAIILDVLICNGLGIFAGLQICKWLSMRNFHWESIKHIKTNRGRFKRMVMQFT 320

  Fly   322 PESWSAIRWLDPKSTAMRFAAVIQLVIFWQVTELNTFFLKHIFEMPPDHFIVIGRLIFIGLFVAP 386
            ||||:...|.....|..|..:|...|:.|.:|||||||:||:|.:...|.:|..|||.|....||
 Worm   321 PESWNDFDWGSFTVTIKRTMSVYVFVLIWLLTELNTFFMKHVFSVDTKHPVVFWRLILIAFISAP 385

  Fly   387 SVRQYYVYVTDTRCKRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVIISVAF 451
            |:||:|:|.||...||:|.|||||.|:...||.:|:|.|..:|.|.....||:|:...::.:...
 Worm   386 SIRQFYLYATDPLIKRLGMQCWVYLAVCALEAAICVKFGIHMFPRVAITPIVIWILFLIVGTFFS 450

  Fly   452 VYLAVYWQQR 461
            |:.:|:|.:|
 Worm   451 VWFSVWWAKR 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 149/275 (54%)
pssy-1NP_509673.1 PSS 149..424 CDD:281084 149/275 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 328 1.000 Domainoid score I630
eggNOG 1 0.900 - - E1_KOG2735
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7494
Inparanoid 1 1.050 430 1.000 Inparanoid score I964
Isobase 1 0.950 - 0 Normalized mean entropy S2985
OMA 1 1.010 - - QHG45692
OrthoDB 1 1.010 - - D370266at33208
OrthoFinder 1 1.000 - - FOG0004865
OrthoInspector 1 1.000 - - otm14134
orthoMCL 1 0.900 - - OOG6_101724
Panther 1 1.100 - - O PTHR15362
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3646
SonicParanoid 1 1.000 - - X3988
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.860

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