DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)77CDf and pssy-2

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_499786.3 Gene:pssy-2 / 176776 WormBaseID:WBGene00012095 Length:502 Species:Caenorhabditis elegans


Alignment Length:493 Identity:190/493 - (38%)
Similarity:290/493 - (58%) Gaps:22/493 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DTSFSSAGDAERDHPAYKSGAASAPATP----------TKRRDGSDGSVSSAGARRKRKDEIAQT 74
            |:.:|     :.:||...|.:.|.|.:.          |...|.:..||....|....:.|:.:.
 Worm     6 DSDYS-----QIEHPRISSRSRSPPVSGQEQNLEDEGFTTECDNNPDSVDRKFAGLLDRMELEKK 65

  Fly    75 -FVIVNERPVDDISLDFFYKPHTITLLAVSVLAVMYFA-FVRNEANVDENLWAGLLCIVFFFLIV 137
             :.::|||.|||:::|.|||||:||:|.:.:..::|.| |.:.|.:.::|.:.|.|.....||::
 Worm    66 HYDMINERIVDDVTMDQFYKPHSITVLVLVIALLIYKATFGKAENSTEKNYYDGFLGAGALFLLI 130

  Fly   138 SVIAFPNGPFTRPHPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPKLKNFHIDMEKEY 202
            |.:.||||||.||||.:||::||.||:|::.|||.:||::..::.|..|:|.:........||||
 Worm   131 SALTFPNGPFIRPHPILWRVIFGLSVIYVIVLQFALFQSFDDLKKILTWLDSEGLGQKSLEEKEY 195

  Fly   203 GVNCSDISWDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWEITEITFAHLLPNFIECW 267
            ...|.::|..::..|:|.||:.||.||..|.:|:||..:.|.:|::||.||:.|..|||||.|||
 Worm   196 ASECWNLSPAKIWSHVDFFAFAHFTGWIMKTLLLRHWVLCWFLSIIWEFTELMFIDLLPNFAECW 260

  Fly   268 WDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTTTGKIKRAMLQFTPESWSAIRWLD 332
            ||:|||||::|||:||::|:|:|..|:||::.|.||::|.:..||:||..|||||.|||...|.:
 Worm   261 WDSLILDVLLCNGVGIYVGMKLCNFLQMRQFHWESIRNIKSRRGKMKRFALQFTPASWSGYDWYN 325

  Fly   333 PKS--TAMRFAAVIQ-LVIFWQVTELNTFFLKHIFEMPPDHFIVIGRLIFIGLFVAPSVRQYYVY 394
            .||  .|:|...::. ||.||.:.||||||:||:|.:...|.:|..|:|.|.:..||::||:||:
 Worm   326 SKSKANALRRTCLLSFLVFFWLLAELNTFFIKHVFAIDTKHPVVFWRIILIAVIAAPTIRQFYVF 390

  Fly   395 VTDTRCKRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVIISVAFVYLAVYWQ 459
            .||...:|||.|.||:..|.|.|..:|:|.|..:|.:|...|::|| .:.:||......||..|.
 Worm   391 STDPLTRRVGMQSWVFVVICVLELAICVKCGGIMFAKTSGWNMLLW-AMSIIIGTISCILASTWY 454

  Fly   460 QRQLKKVSSTPAKTKETI-PASSSSPSKGKLSPQKEKK 496
            .......:....|.:..: ...||..:.|.|.....||
 Worm   455 AEHFGTTARVLVKGRRRLCYLESSHENLGMLQDDVIKK 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 127/277 (46%)
pssy-2NP_499786.3 PSS 143..419 CDD:335194 126/275 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 328 1.000 Domainoid score I630
eggNOG 1 0.900 - - E1_KOG2735
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7494
Inparanoid 1 1.050 430 1.000 Inparanoid score I964
Isobase 1 0.950 - 0 Normalized mean entropy S2985
OMA 1 1.010 - - QHG45692
OrthoDB 1 1.010 - - D370266at33208
OrthoFinder 1 1.000 - - FOG0004865
OrthoInspector 1 1.000 - - otm14134
orthoMCL 1 0.900 - - OOG6_101724
Panther 1 1.100 - - LDO PTHR15362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3988
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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