DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)77CDf and ptdss2

DIOPT Version :9

Sequence 1:NP_649242.1 Gene:l(3)77CDf / 40281 FlyBaseID:FBgn0287585 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_001337112.2 Gene:ptdss2 / 100004136 ZFINID:ZDB-GENE-130424-2 Length:452 Species:Danio rerio


Alignment Length:435 Identity:151/435 - (34%)
Similarity:229/435 - (52%) Gaps:47/435 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 DDISLDFFYKPHTITLLAVSVLAVMYFAFVRNEA-NVDENLWAGLLCIVFFFLIVSVIAFPNGPF 147
            ||.:..||::.||:|:|.:...|::|...:.... :...|...|::..:..||...|....:|||
Zfish    26 DDGTNTFFWRAHTVTVLFILTCALVYVTLLEETPHDTAYNTKRGIVASILVFLCFGVTQAKDGPF 90

  Fly   148 TRPHPAVWRILFGCSVLYLLTLQFLMFQNYPTIRSIFYWIDPKLKNFHIDM-EKEYGVNCSDIS- 210
            ||||||.||.....||:|.|.|.|::||.....|....:|||||   .:.: |:.||.||.... 
Zfish    91 TRPHPAYWRFWLCVSVVYELFLIFILFQTVHDGRQFMKYIDPKL---GVPLPERGYGGNCLIYDP 152

  Fly   211 ----------WDRVKGHLDVFAWGHFLGWAFKAILIRHMGILWAISVMWEITEITFAHLLPNFIE 265
                      ||::.|    |...|||||..|.::||...:...||||:|..|.:..|.||||.|
Zfish   153 GHPTDPFHNIWDKMDG----FVPAHFLGWYIKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE 213

  Fly   266 CWWDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTTTGKIKRAMLQFTPESWSAIRW 330
            ||||..|:||::||||||:.|:|....|.|:.|:|..:.:|.|..|||||...||||.||....|
Zfish   214 CWWDHWIMDVLVCNGLGIYCGMKTLGWLSMKPYQWQGLWNIPTYKGKIKRIAFQFTPYSWVKFEW 278

  Fly   331 LDPKSTAMRFAAVIQLVIFWQVTELNTFFLKHIFEMPPDHFIVIGRLIFIGLFVAPSVRQYYVYV 395
             .|.|...|:.||:.::..:.:.|||||:||.:..|||:|::|:.||:|.......::|:.|.::
Zfish   279 -RPASNLRRWLAVLGIIFMFLLAELNTFYLKFVMWMPPEHYLVLFRLVFFVNVGGVAMREIYDFM 342

  Fly   396 TDTRC-KRVGTQCWVYGAIMVSEAILCIKNGKELFERTQAINIVLWLTVQVIISVAFVYLAVYWQ 459
            .|.:. |::|.|.|:..||.|:|.::.:|..    ..|..:.|..::|...|:.:|.:.:...|:
Zfish   343 DDPKFHKKLGQQAWIVAAITVTEFLIVVKYD----PNTIMLPIPFFITQCWILGIALILVWTLWR 403

  Fly   460 -------------QRQLKKVSSTPAKTKETIPASSSSPS-KGKLS 490
                         :|:.::|||..       ..|||:|| :.||:
Zfish   404 FFIRDITLRYKETRRRRQEVSSER-------DGSSSAPSGRSKLN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)77CDfNP_649242.1 PSS 150..425 CDD:397256 114/287 (40%)
ptdss2XP_001337112.2 PSS 93..372 CDD:281084 113/286 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370266at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101724
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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