Sequence 1: | NP_001112367.1 | Gene: | rrp9 / 402808 | ZFINID: | ZDB-GENE-060427-1 | Length: | 471 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
Alignment Length: | 487 | Identity: | 204/487 - (41%) |
---|---|---|---|
Similarity: | 306/487 - (62%) | Gaps: | 33/487 - (6%) |
- Green bases have known domain annotations that are detailed below.
Zfish 2 SSFFI-------KKKLVSSATNKGDLKRKSNTDDGKG---------RSKRFSKRMNEEISSDSEN 50
Zfish 51 ESADPGRKQQ----ENEEDEIEETAQEKKLRLAKLYLDQLREEEDKKAEEESFEADLIAGRLQED 111
Zfish 112 VLEQKGKLQRLIAKELKAPDPAEIRLLRGHKLPVTCLVITPDEKHIFSASKDCSIIKWDVESGKK 176
Zfish 177 VQK--IAGGRKGTE--DCHTAHILCMAISSDGKYLASGDMNKHIMIWDPETCKHLFKFTGHRGAI 237
Zfish 238 SGLAFRRGTHTLYSASHDRSIKVWSVDENAYVETLFGHQDAITGLDCLSRERCVTTGGRDRTVRV 302
Zfish 303 WKIAEESQLVFHGHEGSIDCVQLINEEHMVTGGDDGAVSIWTVNKKKPLSSVKQAHGVRGSAGLE 367
Zfish 368 QPYWVSSVAALHNSDTVASGASGSHNSSVQLWKCGQGFRGLELLFSVPVNGFVNSLKFSNSGKFL 432
Zfish 433 VAGVGQEHRLGRWWRIKEAKNGLYIIPLKRQA 464 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rrp9 | NP_001112367.1 | WD40 | 114..>445 | CDD:225201 | 148/334 (44%) |
WD40 | 134..435 | CDD:238121 | 132/304 (43%) | ||
WD40 repeat | 145..190 | CDD:293791 | 13/48 (27%) | ||
WD40 repeat | 196..232 | CDD:293791 | 15/35 (43%) | ||
WD40 repeat | 237..273 | CDD:293791 | 23/35 (66%) | ||
WD40 repeat | 280..314 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 320..355 | CDD:293791 | 18/34 (53%) | ||
WD40 repeat | 372..413 | CDD:293791 | 12/40 (30%) | ||
WD40 repeat | 420..445 | CDD:293791 | 12/24 (50%) | ||
U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 26/71 (37%) |
WD40 | <150..484 | CDD:225201 | 150/337 (45%) | ||
WD40 | 156..416 | CDD:295369 | 120/265 (45%) | ||
WD40 repeat | 163..203 | CDD:293791 | 11/39 (28%) | ||
WD40 repeat | 218..254 | CDD:293791 | 15/35 (43%) | ||
WD40 repeat | 259..295 | CDD:293791 | 23/35 (66%) | ||
WD40 repeat | 302..336 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 342..379 | CDD:293791 | 18/36 (50%) | ||
WD40 repeat | 391..431 | CDD:293791 | 13/42 (31%) | ||
WD40 repeat | 436..461 | CDD:293791 | 12/24 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170581745 | |
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I9638 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3452 | |
Inparanoid | 1 | 1.050 | 377 | 1.000 | Inparanoid score | I2048 |
OMA | 1 | 1.010 | - | - | QHG54739 | |
OrthoDB | 1 | 1.010 | - | - | D453052at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
OrthoInspector | 1 | 1.000 | - | - | oto40513 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102033 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1935 |
SonicParanoid | 1 | 1.000 | - | - | X3065 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.940 |