DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5104 and AT5G56020

DIOPT Version :10

Sequence 1:NP_649241.1 Gene:CG5104 / 40280 FlyBaseID:FBgn0037009 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_200413.1 Gene:AT5G56020 / 835700 AraportID:AT5G56020 Length:230 Species:Arabidopsis thaliana


Alignment Length:124 Identity:34/124 - (27%)
Similarity:60/124 - (48%) Gaps:4/124 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FVICFALGILLSLLGSVALFLHRGIVV---FAVFYTLGNVISMASTCFLMGPFKQIKKMFAETRL 101
            |.:..|.|:....: :..:||...:::   ||:.:|||....:.|...|.||..|:..|.:..||
plant    98 FGLLLASGVFFIFI-AFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERL 161

  Fly   102 IATIIVLVMMVLTFIAAIVWKKAGLTLIFIIIQSLAMTWYSLSYIPYARDAVKKTMSAI 160
            ..|:..:..||.|...::|.....|::||..:|.:|:.:|.:||.|.....:|...|.:
plant   162 PLTLGFIATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSGMKFLSSTL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5104NP_649241.1 Got1 37..147 CDD:461210 31/109 (28%)
AT5G56020NP_200413.1 Got1 95..207 CDD:461210 31/109 (28%)

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