DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5104 and AT5G23550

DIOPT Version :10

Sequence 1:NP_649241.1 Gene:CG5104 / 40280 FlyBaseID:FBgn0037009 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_197746.1 Gene:AT5G23550 / 832421 AraportID:AT5G23550 Length:175 Species:Arabidopsis thaliana


Alignment Length:168 Identity:54/168 - (32%)
Similarity:89/168 - (52%) Gaps:16/168 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKLRRVL-----------SGDEPTPEEESSI--ITQINDMSTLSWSTRIKGFVICFALGILLSL 52
            |||:.:.:           ..::...:||||:  :..:|....|:...|..||.||.:.|:..:|
plant     1 MDKMNQAIEKMKMLVGMEVEDEQQAADEESSLSFMEDLNRNCALTTKQRFYGFAICLSAGLTCTL 65

  Fly    53 LGSVALFLHRGIVVFAVFYTLGNVISMASTCFLMGPFKQIKKMFAETRLIATIIVLVMMVLTFIA 117
            |..:..|   ..|.|.:.:||||::::.||.||:||.:|:..|....|:.||.:.|..:::....
plant    66 LSMLVFF---NPVKFGITFTLGNLMALGSTAFLIGPQRQVTMMLDPARIYATALYLASIIIALFC 127

  Fly   118 AIVWKKAGLTLIFIIIQSLAMTWYSLSYIPYARDAVKK 155
            |:..:...|||:.||::...:.||||||||:||..|.|
plant   128 ALYVRNKLLTLLAIILEFTGLIWYSLSYIPFARTMVSK 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5104NP_649241.1 Got1 37..147 CDD:461210 38/109 (35%)
AT5G23550NP_197746.1 Got1 50..157 CDD:461210 38/109 (35%)

Return to query results.
Submit another query.