DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5104 and sftd-3

DIOPT Version :10

Sequence 1:NP_649241.1 Gene:CG5104 / 40280 FlyBaseID:FBgn0037009 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_495905.1 Gene:sftd-3 / 174427 WormBaseID:WBGene00007690 Length:235 Species:Caenorhabditis elegans


Alignment Length:155 Identity:41/155 - (26%)
Similarity:68/155 - (43%) Gaps:24/155 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SGDEPTPEEES-------SIITQINDMSTLSWSTRIKGFVICFALGILLSLLGSVALFLHRGIVV 66
            |||...|...:       |..||...|..::.:.||..|.:|        ::|::..|....:::
 Worm    61 SGDGQLPASRNRKSSGWFSPSTQDESMFGMTRTQRIIAFFMC--------IIGAIFCFSTAAVLI 117

  Fly    67 ---------FAVFYTLGNVISMASTCFLMGPFKQIKKMFAETRLIATIIVLVMMVLTFIAAIVWK 122
                     ||...|||:::.:.|..||:||...:..|.:..|.:.|:..|..:..|..:::..|
 Worm   118 PVILVSTRKFAGLNTLGSLLLLLSFAFLLGPKSYLTHMASPQRRLVTVSYLSALFATLYSSLWLK 182

  Fly   123 KAGLTLIFIIIQSLAMTWYSLSYIP 147
            ....|||..|.|...:.||.|||:|
 Worm   183 STIFTLIAAIFQGFTLVWYVLSYVP 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5104NP_649241.1 Got1 37..147 CDD:461210 31/118 (26%)
sftd-3NP_495905.1 Got1 96..207 CDD:461210 31/118 (26%)

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