DRSC/TRiP Functional Genomics Resources

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Protein Alignment mTerf3 and AT1G56380

DIOPT Version :10

Sequence 1:NP_649240.1 Gene:mTerf3 / 40279 FlyBaseID:FBgn0037008 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001154432.1 Gene:AT1G56380 / 842091 AraportID:AT1G56380 Length:399 Species:Arabidopsis thaliana


Alignment Length:166 Identity:30/166 - (18%)
Similarity:60/166 - (36%) Gaps:32/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 NQKDVYVASLSSNVQDQNSYMIHLQRGE-SSASSSHLVGRINVSTLFSEKVLEREFVLFSSNGEN 180
            |..||||....:.:.:.       ::|| :.|::...:..:..   |.|...:.|:.|.......
plant   125 NHGDVYVIRFYNRLDES-------RKGEIACATAGEALKWVEA---FEEAKQQAEYALSRGGSTR 179

  Fly   181 LKI------------PRTRKNRGLSKKVVHAVKNERRTARLSRTSFIPDL--------GSWDEQF 225
            .|:            ||.|:.....||::...:......|.|.| .:.|:        |...:..
plant   180 TKLSMEANIDLEGHRPRVRRYAYGLKKLIRIGQGPESLLRQSST-LVNDVRGDGFYEGGDNGDAI 243

  Fly   226 QAQNYDCLLKNKLPTNLETLAVVVKQETIEDEIGGW 261
            :|..:.|:....:...|....||:|:..|.:::..:
plant   244 EAHEWKCVRTINVIKRLFGKIVVLKRVRIFEDVANF 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mTerf3NP_649240.1 mTERF <122..307 CDD:460581 27/161 (17%)
AT1G56380NP_001154432.1 mTERF 63..375 CDD:460581 30/166 (18%)

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