DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mTerf3 and AT5G07900

DIOPT Version :9

Sequence 1:NP_649240.1 Gene:mTerf3 / 40279 FlyBaseID:FBgn0037008 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_568185.1 Gene:AT5G07900 / 830684 AraportID:AT5G07900 Length:405 Species:Arabidopsis thaliana


Alignment Length:342 Identity:71/342 - (20%)
Similarity:120/342 - (35%) Gaps:85/342 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 HHEVEV--------LTSPGIT-TKQNDKKTEPAE------------C--------EGSKEVALDF 71
            ||...:        .:||..| |.:|.|..|..:            |        ..|:::.||.
plant    33 HHRKPIFVFSLQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDS 97

  Fly    72 RNREAHVPSFNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPYITFLVDQG 136
            ..|    |:..|....::..|..|..||      :::|..|    |..:.|..:.|.::|.:..|
plant    98 PER----PNTVLNLLRDHGFTTAQISSL------VKKRPVL----LLANAESVLLPKLSFFLSIG 148

  Fly   137 VSPDDFGRMFTKNPLLFKEDL-DDLQTRVNYLKSKRFSDEARQRILTQNPYWLMFS--TRRVDRR 198
            ||.....|....:|.:....| :.|....|:|||...|||.....|.:.. |:...  |:.:...
plant   149 VSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTT-WVFLEDHTKNLVPN 212

  Fly   199 LGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRKSVFTLKEEMGFNAKELSDLVV--------- 254
            :.| ..|..:....::||.|..|.|: ....|..:::....:|||||.::.:.::.         
plant   213 INY-MAETGVPEKCIKLLLTHFPEAV-MQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGN 275

  Fly   255 --------------------------RKPRLLMIPPDDLVERFSYIHQDMGLPHAQIVQCPELL- 292
                                      :.|..:|:....:.....|...:|.:....|.|||.:| 
plant   276 KSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLF 340

  Fly   293 ASREFRLRERHEFLKLL 309
            .|.|.|:..|....|:|
plant   341 FSLEKRIIPRCSVTKVL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mTerf3NP_649240.1 mTERF <122..307 CDD:327630 46/223 (21%)
AT5G07900NP_568185.1 mTERF 105..381 CDD:418649 56/266 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1267
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.