DRSC/TRiP Functional Genomics Resources

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Protein Alignment mTerf3 and EMB3114

DIOPT Version :10

Sequence 1:NP_649240.1 Gene:mTerf3 / 40279 FlyBaseID:FBgn0037008 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_850257.1 Gene:EMB3114 / 818173 AraportID:AT2G36000 Length:333 Species:Arabidopsis thaliana


Alignment Length:219 Identity:42/219 - (19%)
Similarity:94/219 - (42%) Gaps:39/219 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 EKNVKPYITFLVDQGVSPDDFGRMFTKNPLLFKEDLDDLQTRVNYLKSK--RFSDEARQRILTQN 184
            |.::...:.:|...|:   ||..:..::|.|....|..:::.|:|:.:.  .|:.:..:|:::..
plant    70 ESSIHEKLIYLDSLGI---DFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMC 131

  Fly   185 PYWLMFS-TRRVDRRLGYFQKEFKL-SGHDLRLLATREPNAITYNMEH-LRKSVFTLK------- 239
            |..|... |......:.:..:|..: |..|||....|.|..:..:::| ||.:::.|:       
plant   132 PELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDP 196

  Fly   240 ----------------------EEMGFNAKELSDLVVRKPRLLMIP-PDDLVERFSYIHQDMGLP 281
                                  |::||:.:..:.:..|.|:|.... .::...:..|:..:||..
plant   197 HKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRD 261

  Fly   282 HAQIVQCPELLA-SREFRLRERHE 304
            ..::::.|:..: |.|.|::.|||
plant   262 VREVLEFPQYFSFSLENRIKPRHE 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mTerf3NP_649240.1 mTERF <122..307 CDD:460581 42/219 (19%)
EMB3114NP_850257.1 mTERF <151..307 CDD:460581 27/135 (20%)

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