DRSC/TRiP Functional Genomics Resources

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Protein Alignment mTerf3 and C50F4.12

DIOPT Version :9

Sequence 1:NP_649240.1 Gene:mTerf3 / 40279 FlyBaseID:FBgn0037008 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001379123.1 Gene:C50F4.12 / 179336 WormBaseID:WBGene00008236 Length:439 Species:Caenorhabditis elegans


Alignment Length:376 Identity:103/376 - (27%)
Similarity:179/376 - (47%) Gaps:54/376 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QNAAKNATITSQI----RNLRGQ--QSVHHEVEV---------LTSPGITTKQNDKKTEPAECEG 63
            :|..:.|||:|.|    |.|:.:  ::.:.::|.         ||.|  .:..|....:|:|.  
 Worm    79 ENTREVATISSAIIAEARRLKSETGKATYRKIEYTEGELDHTDLTEP--ASPSNPHPFDPSEL-- 139

  Fly    64 SKEVALDFRNREAHVPSFNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPY 128
                        ..|.|.::..:||:|..|:..:.:||||..||....:|..:|:|..| :|:..
 Worm   140 ------------PPVHSHSIVPFVNHSPLLRFLVDIGVDLAEIENTTTVGKHLLRLQIE-DVRQK 191

  Fly   129 ITFLVDQ-GVSPDDFGRMFTKNPLLFKEDLDDLQTRVNYLKSKRFSDEARQRILTQNPYWLMFST 192
            |..:.:: |...:..|...|:||....:|::|:|||:|||:.|:|:...|.:|:.:..|||..:.
 Worm   192 IELMQNEIGFENEAIGPYLTRNPFFLIQDVNDMQTRLNYLELKKFTKSERLKIVDEYRYWLNCNV 256

  Fly   193 RRVDRRLGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRKSVFTLKEEMGFNAKELSDLVVRKP 257
            :.:|.|||:.|::||||....|.:..:||..|.:....:.:.|....:|:.|...:|..||:..|
 Worm   257 QLIDSRLGWLQQQFKLSAKATREIIVKEPRIIMFGTGPIERLVKMFNKELNFTTNQLKMLVMEDP 321

  Fly   258 RLLMIPPDDLVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYD----PQK 318
            |:.|:....:.:.:.|:...|.:.:..|::.|.:|......::.||:|||.||||.|.    .:.
 Worm   322 RIFMMDSKLVSKTYKYVRDVMKINNETILEHPFILRCSLSVIKSRHDFLKRLGRANYQLAEKKES 386

  Fly   319 DLYISPKTIVEGN-----------NFY------FVRNVAKSDLETFDLFLK 352
            .:.||..|..||:           :|.      |....||:....||.||:
 Worm   387 KIDISEVTDPEGSSKESCDLVSLEHFLHPSDAGFAMLAAKTYPVAFDKFLR 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mTerf3NP_649240.1 mTERF <122..307 CDD:327630 53/185 (29%)
C50F4.12NP_001379123.1 mTERF <159..378 CDD:418649 68/219 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158324
Domainoid 1 1.000 105 1.000 Domainoid score I4185
eggNOG 1 0.900 - - E1_KOG1267
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I3109
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45846
OrthoDB 1 1.010 - - D1294087at2759
OrthoFinder 1 1.000 - - FOG0007491
OrthoInspector 1 1.000 - - oto17403
orthoMCL 1 0.900 - - OOG6_105045
Panther 1 1.100 - - LDO PTHR13068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3723
SonicParanoid 1 1.000 - - X5616
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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