DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5078 and ARN1

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:508 Identity:105/508 - (20%)
Similarity:178/508 - (35%) Gaps:150/508 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKFGLKKLLVSLASTSGIGKPSVGHILVVVFLEYFAWGLLTMPMIATLKETFPDHTFLMNGLVMG 66
            :|:.|:.:|:..|...|.|....|:|      .|...|..|        .::.:|:.|  ..:..
Yeast    69 NKWYLQAILLLSAFICGYGYGLDGNI------RYIYTGYAT--------SSYSEHSLL--STINV 117

  Fly    67 VKGILSFLSSPLIGALSDIYGRKVLLLITVIFTSLPIPMMTMDNWWFFVISSI------------ 119
            :..::|..|..:...|||::||..|.:..||               .:|:.:|            
Yeast   118 INAVVSAASQIIYARLSDVFGRLYLFISAVI---------------LYVVGTIIQSQAYDVQRYA 167

  Fly   120 -------SGVLGVSFSVAFAYVADVTTKEERSRSYELVSA-TFAASLVIAPAMGNLIMDRYGINT 176
                   :|.:|| ..:....::|.::.:.| ..|:.|.. .|..:..||   || |..|  .|.
Yeast   168 AGAIFYNAGYVGV-ILILLIILSDFSSLKWR-LLYQFVPTWPFIINTWIA---GN-ITSR--ANP 224

  Fly   177 VVLVATLVSTTNVMFVLLAVPETL-----QQNVRST--------GLSWKQADPFLSLRR------ 222
            ||..:..|.....:|.|..||..|     |...|.|        ..|:.|...|:.:.:      
Yeast   225 VVNWSWDVGMWAFIFPLSCVPIVLCMLHMQWRARKTPEWHALKGQKSYYQEHGFIKILKQLFWML 289

  Fly   223 --VGSDPNVLLLCVVMFTFLLPEAGEYSSVPAYLKLTMGFDFTELSTLVAFMAILGISINVTLG- 284
              ||    |||:...:...|:|           |.|..|...|...:.:....:||..:...|. 
Yeast   290 DVVG----VLLMGCSLGCILVP-----------LTLAGGVKTTWNDSRLIGPFVLGFVLIPILWI 339

  Fly   285 -------------SIVKTLGAKNAIILGLLLELLQLILFAIGYEKWQMWLAGN--------VAAL 328
                         .:||.....:::.:..|::.:..:  |..|....|.:|.|        :|.|
Yeast   340 WEYRFARDPILPYRLVKDRAVWSSMGISFLIDFIYYM--AADYLYTVMIVAVNESVKSATRIATL 402

  Fly   329 SSITFPAVSAYVSLYTDVETQGAVQGMITGMSGLCSGLGP-ALFGIVFYLSDMDLDKNRILIGSV 392
            ||......|.:.:|            ::|    .|:.|.| .:||...::..|.|     |....
Yeast   403 SSFVSTVASPFFAL------------LVT----RCTRLKPFIMFGCALWMVAMGL-----LYHFR 446

  Fly   393 SGDRTVTNPFMIGAISVF-IGILLASYIP-----DEKVSRGRREEFSALKYII 439
            .|.::.:.  :|||:.|: :|..|.:| |     ...||.......:||.|.:
Yeast   447 GGSQSHSG--IIGALCVWGVGTTLFTY-PVTVSVQSAVSHENMATVTALNYTL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 81/411 (20%)
MFS_1 27..368 CDD:284993 78/403 (19%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 103/503 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341841
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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