DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5078 and ARN2

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_011816.2 Gene:ARN2 / 856338 SGDID:S000001039 Length:620 Species:Saccharomyces cerevisiae


Alignment Length:481 Identity:104/481 - (21%)
Similarity:165/481 - (34%) Gaps:155/481 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LVVVFLEYFAWGLLTMPMIATLKETFPDHTFLMN-----GLVMGVKGI---LSFLSSPLIGALSD 84
            |...|:..||:||     .::::.|:  .|:.||     .|:..|..|   :|.:|..:.|.|||
Yeast    73 LFSAFICTFAYGL-----DSSIRGTY--MTYAMNSYSAHSLISTVSVIVLMISAVSQVIFGGLSD 130

  Fly    85 IYGRKVLLLITVIF------------------------------TSLPIPMMTMDN----WWFF- 114
            |:||..|.|::::.                              ..|.:.:|..||    |..| 
Yeast   131 IFGRLTLFLVSIVLYIVGTIIQSQAYDVQRYAAGAVFYYVGLVGVMLQVVLMLSDNSSLKWRLFY 195

  Fly   115 -VISSISGVL--GVSFSVAFAYVADVTTKEERSRSYELVSATFAASLVIAPAMGNLIMDRYGINT 176
             :|.|...::  .||.||..|      .....:.|:.:....|...|...|.:..::..|:.:..
Yeast   196 TLIPSWPSIITTWVSGSVVEA------ANPLENWSWNIAMWAFIFPLCCIPLILCMLHMRWKVRN 254

  Fly   177 VV-----------------------------LVATLVSTTNVMFVLLAVPETLQQNVRSTGLSWK 212
            .|                             :|..|:.|..|..:|  ||.||...|.:...:.|
Yeast   255 DVEWKELQDEKSYYQTHGLVQMLVQLFWKLDVVGVLLFTAGVGCIL--VPLTLAGGVSTNWRNSK 317

  Fly   213 QADPFL--------------SLRRVGSDPNVLL--------------LCVV-------MFTFLLP 242
            ...||:              .|..|...|..||              :|.|       ::|.|:.
Yeast   318 IIGPFVLGFVLVPGFIYWESRLALVPFAPFKLLKDRGVWAPLGIMFFICFVYQMAAGYLYTILVV 382

  Fly   243 EAGE-----------YSSVPAYLKLTMGFDFTELSTLVAFMAILGISINVTLGSIVKTLGAKNA- 295
            ...|           ||.|.|.:...:|...|..|.|.:::...|....:|:|...:....::| 
Yeast   383 AVDESASSATRIINLYSFVTAVVAPFLGLIVTRSSRLKSYIIFGGSLYFITMGLFYRYRSGQDAD 447

  Fly   296 --IILGLLLELLQLILFAIGYEKWQMWLAGNVAALSSITFPAVSAYVSL--YTDVETQGAVQGMI 356
              ||.|:::..|...||  .|.        .:.::.|:|.....|.|:.  ||.....|||...|
Yeast   448 GGIIAGMVIWGLSSCLF--DYP--------TIVSIQSVTSHENMATVTALNYTVFRIGGAVAAAI 502

  Fly   357 TGMSGLCSGLGPALFGIVFYLSDMDL 382
            :|.....| |.|.|   :.|:.|.||
Yeast   503 SGAIWTQS-LYPKL---LHYMGDADL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 100/472 (21%)
MFS_1 27..368 CDD:284993 98/465 (21%)
ARN2NP_011816.2 MFS_ARN_like 69..581 CDD:340880 104/481 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341845
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.