DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5078 and ATR1

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_013591.1 Gene:ATR1 / 854924 SGDID:S000004584 Length:542 Species:Saccharomyces cerevisiae


Alignment Length:511 Identity:102/511 - (19%)
Similarity:169/511 - (33%) Gaps:182/511 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TMPMIATLKETFPDH----TFLMNGLVMGVKGILSFLSSPLIGALSDIYGRKVLLLITVIFTSLP 102
            |:.::..|.::|...    ::||....: |.|....:|    |.|.||||.|.:||:..:...: 
Yeast    89 TLSIMNILSDSFGSEGNSKSWLMASFPL-VSGSFILIS----GRLGDIYGLKKMLLVGYVLVII- 147

  Fly   103 IPMMTMDNWW--------------FFVISSISGVLGVSFSV--AFAYVADVTTKEERSRSYELVS 151
                     |              ||:||.....||::|.:  ....:.::           .|.
Yeast   148 ---------WSLICGITKYSGSDTFFIISRAFQGLGIAFVLPNVLGIIGNI-----------YVG 192

  Fly   152 ATFAASLVIA--PAMGNLIMDRYGINTVVLVATLVSTTN----------------VMFVL--LAV 196
            .||..::||:  .||..:     |.....|.|.|:.|.:                :.|||  .|:
Yeast   193 GTFRKNIVISFVGAMAPI-----GATLGCLFAGLIGTEDPKQWPWAFYAYSIAAFINFVLSIYAI 252

  Fly   197 PETLQQNVRSTGLSWKQADPFLSLRRVGSDPNVLLLCVVMF------------------------ 237
            |.|:..|:....:.|           :||...|:.|.::.|                        
Yeast   253 PSTIPTNIHHFSMDW-----------IGSVLGVIGLILLNFVWNQAPISGWNQAYIIVILIISVI 306

  Fly   238 --------------TFLLPEA--GEYSSVPAYLKLTMGFDFTELSTLVAFMAILGISINVTL--- 283
                          |.|||.|  .:...:...|.|..|:....:.|...|...|.|.....|   
Yeast   307 FLVVFIIYEIRFAKTPLLPRAVIKDRHMIQIMLALFFGWGSFGIFTFYYFQFQLNIRQYTALWAG 371

  Fly   284 GSIVKTL--GAKNAIILGLLLE--------LLQLILFAIG---------YEKWQMWLAGNVAALS 329
            |:....|  |...|:::|..::        ...::.|.:|         :|.:.....|.:..||
Yeast   372 GTYFMFLIWGIIAALLVGFTIKNVSPSVFLFFSMVAFNVGSIMASVTPVHETYFRTQLGTMIILS 436

  Fly   330 ---SITFPAVSAYVSLYTDVETQGAVQGMIT-----GMSGLCSGLGPALFGIVFYLSDMDLDKNR 386
               .::|||.|...|....:|.||....::.     .|| ||.|:|..:      .:.::.|...
Yeast   437 FGMDLSFPASSIIFSDNLPMEYQGMAGSLVNTVVNYSMS-LCLGMGATV------ETQVNSDGKH 494

  Fly   387 ILIGSVSGDRTVTNPFMIGAISVFIGILLAS--------YIPDEKVSRGRREEFSA 434
            :|.|.....              ::||.|||        |:. |...:|||...:|
Yeast   495 LLKGYRGAQ--------------YLGIGLASLACMISGLYMV-ESFIKGRRARAAA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 88/442 (20%)
MFS_1 27..368 CDD:284993 87/435 (20%)
ATR1NP_013591.1 MFS_Amf1_MDR_like 73..517 CDD:341029 96/490 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341866
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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