DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5078 and QDR2

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_012145.1 Gene:QDR2 / 854685 SGDID:S000001383 Length:542 Species:Saccharomyces cerevisiae


Alignment Length:514 Identity:99/514 - (19%)
Similarity:169/514 - (32%) Gaps:149/514 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKF--GLKKLLVSLASTSGIGKPSVGHILVVVFLEYFAWGLLTMPMIATLKETFPDHTFLMNGLV 64
            |:|  ..|.:|::..:.:|             |....| |.:..|:::.::..|.....|:|..|
Yeast    53 SRFSRSFKTVLIAQCAFTG-------------FFSTIA-GAIYYPVLSVIERKFDIDEELVNVTV 103

  Fly    65 MGVKGILSFLSSPLIGALSDIYGRK-VLLLITVIFTSLPIPMMTMDNWWFFVI------SSISGV 122
            : |..:...|:...:|..:|..||: |:|:..||:....|.:.....:...::      :.||.|
Yeast   104 V-VYFVFQGLAPTFMGGFADSLGRRPVVLVAIVIYFGACIGLACAQTYAQIIVLRCLQAAGISPV 167

  Fly   123 LGVSFSVAFAYVADVTTKEERS------RSYELVSATFAASLVIAPAMGNLIMDRYGINTVVLVA 181
            :.::..:    :.||||:.||.      ..::::.:.|.|      .:|..:..|:|...:....
Yeast   168 IAINSGI----MGDVTTRAERGGYVGYVAGFQVLGSAFGA------LIGAGLSSRWGWRAIFWFL 222

  Fly   182 TLVSTTNVMFVLLAVPETLQQNVRSTG----LSWKQADPFL-------SLRRVGSDPNVLLLCVV 235
            .:.|....:...|.:||| ::|:...|    .|:....|.|       ||.....|...|.| ..
Yeast   223 AIGSGICFLASFLILPET-KRNISGNGSVTPKSYLNRAPILVLPTVRKSLHLDNPDYETLEL-PT 285

  Fly   236 MFTFLLPEAGEYSSVPAY----LKLTMGFDFTELST-LVAFMAILGISINVTLGSIVKTLGAKNA 295
            ....|.|    :..:.||    |.|..|..|...:| |.|....|....::|:..:         
Yeast   286 QLNLLAP----FKILKAYEICILMLVAGLQFAMYTTHLTALSTALSKQYHLTVAKV--------- 337

  Fly   296 IILGLL-----LELLQLILFAIGYEKW---------QMWLAGNVAAL------------------ 328
               ||.     :..|..|:.|..|..|         |.||....:.|                  
Yeast   338 ---GLCYLPSGICTLCSIVIAGRYLNWNYRRRLKYYQNWLGKKRSKLLEEHDNDLNLVQRIIEND 399

  Fly   329 SSITFPAVSAYVSLYTDVETQGAVQGMITGMSGLC------------------SGLGPALFGIVF 375
            ...||....|        ..|.|...::...||.|                  ||........:.
Yeast   400 PKYTFNIFKA--------RLQPAFVTLLLSSSGFCAYGWCITVKAPLAAVLCMSGFASLFSNCIL 456

  Fly   376 YLS-----DMDLDKNRILIGSVSGDRTVTNPFMIGAIS------------VFIGILLAS 417
            ..|     |:...|.....|.::..|.:.:...|.|:|            .|:|.|.:|
Yeast   457 TFSTTLIVDLFPTKTSTATGCLNLFRCILSAVFIAALSKMVEKMKFGGVFTFLGALTSS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 82/426 (19%)
MFS_1 27..368 CDD:284993 82/419 (20%)
QDR2NP_012145.1 MFS_Tpo1_MDR_like 64..530 CDD:340881 95/503 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341876
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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