DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5078 and VBA3

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:493 Identity:91/493 - (18%)
Similarity:165/493 - (33%) Gaps:146/493 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKLLVSLASTSGIGKPSVGHILVVVFLEYFAW-----------GLLTMPMIATLKETFPDHTFLM 60
            :.|::|:.|.:......||.|:...|..:..|           ||..:..:.|.|..        
Yeast    35 RPLVISILSCAFAVAAIVGPIIGGAFTTHVTWRWCFYINLPIGGLAIIMFLLTYKAE-------- 91

  Fly    61 NGLVMGVKGILSFLSSPLIGALSDIYGRKV-------LLLITVIFTSLPIPMMTMDNWWFFVISS 118
                  .||||..:.. .||.:|.....|.       .|:..:||        ..|.:.|.:.|:
Yeast    92 ------NKGILQQIKD-AIGTISSFTFSKFRHQVNFKRLMNGIIF--------KFDFFGFALCSA 141

  Fly   119 --ISGVLGVSFSVAFAYVADVTTKEERSRSYELVSATFAASLVIAPAMGNLIMDRYGINTVVLVA 181
              :..:||::|.                                    ||    :|..|:..::|
Yeast   142 GLVLFLLGLTFG------------------------------------GN----KYSWNSGQVIA 166

  Fly   182 TLVSTTNVMFVLLAVPETL---QQNVRSTGLSWKQADPFLSLRRVGSDPNVLLLCVVMFTFLLPE 243
            .||... ::|:...|.:..   :.|.....:|::   |.| |||:.:.|.::::.:|.|......
Yeast   167 YLVLGV-LLFIFSLVYDFFLFDKFNPEPDNISYR---PLL-LRRLVAKPAIIIINMVTFLLCTGY 226

  Fly   244 AGEYSSVPAYLKLTMGFDFTELSTLVAFMAILGISINVTLGSIVKTLG-AKNAIILGLLLELLQL 307
            .|:......:.:|.......:....:..:.|..:...:..|.|.|.|| .|..:|.|.:|.::..
Yeast   227 NGQMIYSVQFFQLIFASSAWKAGLHLIPIVITNVIAAIASGVITKKLGLVKPLLIFGGVLGVIGA 291

  Fly   308 ILFAIGYEKWQMWLAGNVAALS-----------SITFPAVSAYVSLYTDVETQGAVQGM----IT 357
            .|         |.|..|.:..|           |:.|...::.:|....:........|    :|
Yeast   292 GL---------MTLMTNTSTKSTQIGVLLLPGFSLGFALQASLMSAQLQITKDRPEAAMDFIEVT 347

  Fly   358 GMSGLCSGLGPALFGI----VFYLS-------------------DMDL------DKNRILIGSVS 393
            ..:.....||..|.|:    ||..|                   ||.|      |.:...||::.
Yeast   348 AFNTFMKSLGTTLGGVLSTTVFSASFHNKVSRAHLEPYEGKTVDDMILYRLQNYDGSHSTIGNIL 412

  Fly   394 GDRTVTNPFMIGAISVFIGILLASYIPDEKVSRGRREE 431
            .| ::.|.|.:......:|.|..|:..::|:...:::|
Yeast   413 SD-SIKNVFWMDLGFYALGFLFCSFSSNKKLIIPKKDE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 69/390 (18%)
MFS_1 27..368 CDD:284993 66/379 (17%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 74/410 (18%)
MFS <1..>181 CDD:421695 37/209 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341893
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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