DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5078 and GEX1

DIOPT Version :9

Sequence 1:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_009863.2 Gene:GEX1 / 850289 SGDID:S000000575 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:598 Identity:106/598 - (17%)
Similarity:180/598 - (30%) Gaps:244/598 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKLLVSLASTSGIGKPSVGHILVVVFLEYFAWGLLTMPMIATLKET--------FPDHTFLMNGL 63
            |.||:|.|...|.|          :.|:|            ||:.|        :.:|:.|  ..
Yeast    59 KILLISTAFVCGFG----------ISLDY------------TLRSTYTGYATNSYSEHSLL--ST 99

  Fly    64 VMGVKGILSFLSSPLIGALSDIYGRKVLLLITVIF------------------------------ 98
            |..:..::|..|..:...|||.:||..|.|:..||                              
Yeast   100 VQVINAVVSVGSQVVYSRLSDHFGRLRLFLVATIFYIMGTIIQSQATRLTMYAAGSVFYNCGYVG 164

  Fly    99 TSLPIPMMTMD--------------NWWFFVISSISG--------------------------VL 123
            |:|.:.::..|              .|.:.:|..|||                          .|
Yeast   165 TNLLLTLILSDFSSLKWRMFYQYASYWPYIIIPWISGNIITAANPQKNWSWNIAMWAFIYPLSAL 229

  Fly   124 GVSFSVAFAYVADVTTKEERSRSYE------------------------LVSATFAASLVIAP-A 163
            .:.|.:.:.......|.|.||...:                        ::..|.:...::.| .
Yeast   230 PIIFLILYMKYKSSKTAEWRSLKEQARKERTGGLFENLVFLFWKLDIVGILLITVSLGCILVPLT 294

  Fly   164 MGNLIMDRYGINTVVLVATLVSTTNVMFVLLAVPETLQQNVRSTGLSWK---QADPFLSLRRVGS 225
            :.|....::  :...::|||||...:.|:.               |.|:   ...|.|..:.: |
Yeast   295 LANETSQKW--HNSKIIATLVSGGCLFFIF---------------LYWEAKFAKSPLLPFKLL-S 341

  Fly   226 DPNV--------------LLLCVVMFTFLLPEAGEYS-------SVPAYLKLTMGFDFTELSTLV 269
            |..:              .:.|..::..||....|.|       ::|.::..|....:   |.||
Yeast   342 DRGIWAPLGVTFFNFFTFFISCDYLYPVLLVSMKESSTSAARIVNLPDFVAATASPFY---SLLV 403

  Fly   270 AFMAILGISI-------NVTLGSIVKTLGAKN--------AIILGL--------LLELLQLILFA 311
            |....|.:|:       .|.:|...|..|...        ::|:||        ::.:||     
Yeast   404 AKTRKLKLSVIGGCAAWMVCMGLFYKYRGGSGSHEGVIAASVIMGLSGLLCSNSVIVILQ----- 463

  Fly   312 IGYEKWQMWLAGNVAALSSI--TFPAVSAYVSLYTDVETQGAVQGMI---TGMSGLCSGLGPALF 371
                  .|.....:|.::.|  ||..:.|.:.        .:|.|.|   |..:.|...||....
Yeast   464 ------AMTTHSRMAVITGIQYTFSKLGAAIG--------ASVSGAIWTQTMPNQLYKNLGNDTL 514

  Fly   372 GIVFY------LSDMDLDKNRILIGSVSGDRTVTNPFMIGAISVFIGILLASYIP---------- 420
            ..:.|      :||...       ||...|..|.:...:..|.:.:|  ||..:|          
Yeast   515 AEIAYASPYTFISDYPW-------GSPERDAVVESYRYVQRIIMTVG--LACTVPFFAFTMFMRD 570

  Fly   421 DEKVSRGRREEFS 433
            .|.:.:...|||:
Yeast   571 PELIDKATHEEFT 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5078NP_649238.3 MFS 27..375 CDD:119392 83/502 (17%)
MFS_1 27..368 CDD:284993 82/495 (17%)
GEX1NP_009863.2 MFS_ARN_like 59..571 CDD:340880 102/584 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341849
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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