DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17637 and si:ch211-262i1.4

DIOPT Version :9

Sequence 1:NP_649237.1 Gene:CG17637 / 40275 FlyBaseID:FBgn0037004 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_021328126.1 Gene:si:ch211-262i1.4 / 101884492 ZFINID:ZDB-GENE-140106-10 Length:351 Species:Danio rerio


Alignment Length:443 Identity:75/443 - (16%)
Similarity:140/443 - (31%) Gaps:165/443 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKFLRPLVKVLVNRSGIGKASVWHAVIVTFMHYFSWGLLTVPFIEKLSGSFG---------NRVL 59
            |..:.|:  |::|:.|..              :|...|....:...:..:.|         :|.|
Zfish     5 LSLVEPV--VVINKLGTS--------------FFEMALTQTVYNRSMKAAAGDSNQAQAMSSRFL 53

  Fly    60 LVDGLVYGVRGILGFVTTPVMGAISDFHGRKVV-----------MLLAVATTYAPIPFMMLKSWW 113
            |:..::..|..:|..:.   :..::|.||.||.           |...|...|..:|...|   :
Zfish    54 LIQSVLSSVMAMLSIIP---LSRMADHHGPKVFLVSSQMGSVLGMFTLVIFMYCEVPLEFL---Y 112

  Fly   114 FFAILTVSSICGSTYSSSLAYVADTTTVENRSKGYGFVAASFGAGIA--FSPSLGNYLMKSYGSA 176
            ..::|...|..|..:.:.:|.:|..:: |.|.:........|..|||  ....|..||.: .|.:
Zfish   113 LGSLLHGLSGGGPMFWAGVAALASLSS-EQRKRTLKLNIVDFCFGIAGVVGGLLSGYLYQ-VGPS 175

  Fly   177 SVILIATITGMINILFIIFAVPESLVLKEKKVILNENNDNKVEDTKVDDISPKEKKENLNGEGKV 241
            .::|.|.:...:.:|:.:||:.:|.:                                ...||.|
Zfish   176 VLLLTAILITTVALLYSVFALSDSRL--------------------------------SYSEGMV 208

  Fly   242 NVEVNKPTSQNIVTNKELDQQFSKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIY 306
            ..|                                                        |:|.::
Zfish   209 GAE--------------------------------------------------------NVLQLF 217

  Fly   307 L----ITFLSIWPFAGVDSTAPVYLKTNMGFEYEEVSMMLGLLSVLAITSNILLGYIMNIVGAKW 367
            :    :::.|:|...|..:|:.:||.:.:.        :|.|.:|:..|:..|||.:.|..|   
Zfish   218 VLKPPLSWDSVWAGYGRAATSAMYLSSFLA--------VLSLFNVMGDTALTLLGIVSNCTG--- 271

  Fly   368 SIRLGLLLLFLQMLFFGFGTHHWMYWLSSILAALATIIPA----ANNAVASIY 416
                        |....|....|:|:|..:...|..::..    :|....|||
Zfish   272 ------------MAIMAFTMESWIYFLGRVFGLLQLLLAVTDLLSNVCFTSIY 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17637NP_649237.1 MFS 25..487 CDD:119392 70/422 (17%)
MFS_1 30..441 CDD:284993 70/417 (17%)
si:ch211-262i1.4XP_021328126.1 MFS_1 57..342 CDD:331686 64/375 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.