DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17637 and slc46a1

DIOPT Version :9

Sequence 1:NP_649237.1 Gene:CG17637 / 40275 FlyBaseID:FBgn0037004 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001120610.1 Gene:slc46a1 / 100145771 XenbaseID:XB-GENE-961470 Length:462 Species:Xenopus tropicalis


Alignment Length:499 Identity:95/499 - (19%)
Similarity:177/499 - (35%) Gaps:138/499 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VTFMHYFSWGL---LTVPFI-EKLSGSFG-NRVLLVDGLVYGVRG-------------------- 70
            |.|:..|:..|   ||..:: ::||...| |...::|..|.|.:.                    
 Frog    29 VLFLSMFALALQGPLTTQYLWDRLSADIGFNGTRILDCTVNGSKSTGALQQEVETLTSHWSLYIN 93

  Fly    71 ----ILGFVTTPVMGAISDFHGRKVVM------LLAVATTYAPIPFMMLKSWWFFAILTVSSICG 125
                ::|..:..::|..||..||:.|:      |...|..|..:.:..|...:|.....:|.|.|
 Frog    94 LGGFLVGLFSVMLLGPWSDKVGRRPVLFFPCIGLALQAALYLVVMYQELHVAYFLIGRFISGISG 158

  Fly   126 S---TYSSSLAYVADTTTVENRSKGYGFVAASFGAGIAFSPSLGNYLMKSYGSASVILIATITGM 187
            .   ..:...||:||.:..::|:.....:.|..|.....:..:|.:..|:.|..:...:.....:
 Frog   159 DFNMILAGCFAYIADVSDRQSRTFRVAILEACLGIAGMVASIIGGHWRKAQGYINPFWLVFAVNL 223

  Fly   188 INILFIIFAVPESLVLKEKKVILNENNDNKVEDTKVDDISPKEKKENLNGEGKVNVEVNKPTSQN 252
            ...:::.|.|.||:                           |:||                 ...
 Frog   224 FTAVYVYFCVEESV---------------------------KDKK-----------------PAR 244

  Fly   253 IVTNKELDQQFSKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITFLSIW--P 315
            :.|::.. |.|.:...:..:...:.|:   .|.|..|..|:......|||.|:|.:::...|  .
 Frog   245 LFTHRHY-QTFFRLFTVSGENNRRRKL---CLYSLALLVVVTVHMGAKNLFVLYELSYPLCWDSD 305

  Fly   316 FAGVDSTAP--VYLKTNMGFEYEEVSMMLGLLSVLAITSNIL-LGYIMNIVGAKWSIRLGLLLLF 377
            ..|..|.|.  .||.:..|         |.|..:....|.:. :|:|.||        .||:::.
 Frog   306 LIGYGSAAEHLTYLSSLAG---------LRLFQLCLADSWVAEMGFISNI--------SGLVVIS 353

  Fly   378 L----QMLFFGFGTHHWMYWLSSILAALATIIPAANNAVASIYASPDNRGAVLGIISGIECLSEG 438
            |    .::|.|:|...:         |:|| .|...:.::.: .....:||:...::.:|.||..
 Frog   354 LASTTPVMFTGYGLRFF---------AMAT-TPVIRSKLSKM-VEEGEQGALFSSVACVEGLSYL 407

  Fly   439 VGPAFFGLLFFIFQDDSETDLKVNSPISMPFVISAISVFVAIVL 482
            :..|.|..|:               |.::.|:.....:|.|::|
 Frog   408 LATAVFNSLY---------------PATLHFMQGFPFLFGALLL 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17637NP_649237.1 MFS 25..487 CDD:119392 95/499 (19%)
MFS_1 30..441 CDD:284993 87/456 (19%)
slc46a1NP_001120610.1 MFS 79..446 CDD:119392 82/449 (18%)
MFS_1 97..410 CDD:284993 74/388 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5729
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.