DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18281 and VBA3

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:443 Identity:83/443 - (18%)
Similarity:142/443 - (32%) Gaps:162/443 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VSSICGSTYSSSLAYVADTTTVENRSKG--YGIVAASFGAGIAFSPSLGN------------YLM 170
            |:|:.||.. .:|.:|...|.|..||:.  ..|::.:|.......|.:|.            |:.
Yeast    10 VASVGGSGL-QTLCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPIIGGAFTTHVTWRWCFYIN 73

  Fly   171 KSYGSASVILIAAITGLINIMFIIFAVPESLVLKEKNNMLDEESDNKMEDIN----PKERKEILN 231
            ...|           ||..|||:       |..|.:|..:.::..:.:..|:    .|.|.:: |
Yeast    74 LPIG-----------GLAIIMFL-------LTYKAENKGILQQIKDAIGTISSFTFSKFRHQV-N 119

  Fly   232 REEKLNNHV------------------------SANKSNHGTSQ--------------NLVTNKE 258
            .:..:|..:                        ..||.:..:.|              :||.:..
Yeast   120 FKRLMNGIIFKFDFFGFALCSAGLVLFLLGLTFGGNKYSWNSGQVIAYLVLGVLLFIFSLVYDFF 184

  Fly   259 LGQQFNKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITFL------------ 311
            |..:||.|.            ||.|....    :||:......:::|.::|||            
Yeast   185 LFDKFNPEP------------DNISYRPL----LLRRLVAKPAIIIINMVTFLLCTGYNGQMIYS 233

  Fly   312 ----------SIWPFAGVDSTAPVYLKTNMGFEYEEVSMMLGLLSVLAITSNLLLGYIINIVGAK 366
                      |.|. ||:.....|............::..|||:..|     |:.|.::.::|| 
Yeast   234 VQFFQLIFASSAWK-AGLHLIPIVITNVIAAIASGVITKKLGLVKPL-----LIFGGVLGVIGA- 291

  Fly   367 WSIRLGLL--------------LLLLQLFFFGFGTHHWMYWLSSILAALATIIPAANNAVASIYA 417
                 ||:              :|||..|..||          ::.|:|.:         |.:..
Yeast   292 -----GLMTLMTNTSTKSTQIGVLLLPGFSLGF----------ALQASLMS---------AQLQI 332

  Fly   418 SPDNRGAVLGII--SGIECLSEGVGPAFFGVL-FFIFQDDSKNKVNSPISMPF 467
            :.|...|.:..|  :......:.:|....||| ..:|.....|||:.....|:
Yeast   333 TKDRPEAAMDFIEVTAFNTFMKSLGTTLGGVLSTTVFSASFHNKVSRAHLEPY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 83/443 (19%)
MFS_1 30..441 CDD:284993 74/414 (18%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 78/425 (18%)
MFS <1..>181 CDD:421695 33/190 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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