DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18281 and GEX1

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_009863.2 Gene:GEX1 / 850289 SGDID:S000000575 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:542 Identity:93/542 - (17%)
Similarity:172/542 - (31%) Gaps:208/542 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KLSGSFGNRVLLVDGLVYGVRGIL--------------------GFVTTPVMGA--ISDFHGRKV 91
            :||..||...|.:...::.:.|.:                    |:|.|.::..  :|||...|.
Yeast   117 RLSDHFGRLRLFLVATIFYIMGTIIQSQATRLTMYAAGSVFYNCGYVGTNLLLTLILSDFSSLKW 181

  Fly    92 VMLLAVATTYAPIPFMMLKSWWFFAILTVSSICGSTYSSSLAYVADTTTVENRSKGYGIVAASFG 156
            .|            |....|:|.:.|:...|             .:..|..|..|.:        
Yeast   182 RM------------FYQYASYWPYIIIPWIS-------------GNIITAANPQKNW-------- 213

  Fly   157 AGIAFSPSLGNYLMKSYGSASVILIAAITGLINIMFIIFAVPESLVLKEKNNMLDEESDNKMEDI 221
                           |:..|....|..::.| .|:|:|      |.:|.|::...|     ...:
Yeast   214 ---------------SWNIAMWAFIYPLSAL-PIIFLI------LYMKYKSSKTAE-----WRSL 251

  Fly   222 NPKERKEILNREEKLNNHVSANKSNHGTSQNLVTNKELGQQFNKEE------------------N 268
            ..:.|||                ...|..:|||.      .|.|.:                  .
Yeast   252 KEQARKE----------------RTGGLFENLVF------LFWKLDIVGILLITVSLGCILVPLT 294

  Fly   269 LQNDLTEK--------EKIDNGSLNSSDL-WEVLRKSRKDKNLLVIYLITFLSIWPFAGV----- 319
            |.|:.::|        ..:..|.|....| ||.  |..|.. ||...|::...||...||     
Yeast   295 LANETSQKWHNSKIIATLVSGGCLFFIFLYWEA--KFAKSP-LLPFKLLSDRGIWAPLGVTFFNF 356

  Fly   320 -------DSTAPVYLKTNMGFEYEEVSMMLGLLSVLAITSNLLLGYII--------NIVG--AKW 367
                   |...||.| .:|.......:.::.|...:|.|::.....::        :::|  |.|
Yeast   357 FTFFISCDYLYPVLL-VSMKESSTSAARIVNLPDFVAATASPFYSLLVAKTRKLKLSVIGGCAAW 420

  Fly   368 SIRLGLLLLLLQLFFF----GFGTHHWMYWLSSILAALATIIPAANNAVASIYASPDNRGAVLGI 428
            .:.:||        |:    |.|:|..:. .:|::..|:.:: .:|:.:..:.|...:  :.:.:
Yeast   421 MVCMGL--------FYKYRGGSGSHEGVI-AASVIMGLSGLL-CSNSVIVILQAMTTH--SRMAV 473

  Fly   429 ISGIECLSEGVGPAFFGVLFFIFQDDSKNKVNSPISMPFVISAIGVFVAIVLTGFIKKETVEKAP 493
            |:||:                                 :..|.:|..:...::|.|..:|:... 
Yeast   474 ITGIQ---------------------------------YTFSKLGAAIGASVSGAIWTQTMPNQ- 504

  Fly   494 LIYKIIDDASEDEVEPLAKTTF 515
             :||.:.:.:..|:...:..||
Yeast   505 -LYKNLGNDTLAEIAYASPYTF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 86/510 (17%)
MFS_1 30..441 CDD:284993 83/466 (18%)
GEX1NP_009863.2 MFS_ARN_like 59..571 CDD:340880 93/542 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341848
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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