DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18281 and AT5G42210

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001318729.1 Gene:AT5G42210 / 834226 AraportID:AT5G42210 Length:438 Species:Arabidopsis thaliana


Alignment Length:504 Identity:96/504 - (19%)
Similarity:194/504 - (38%) Gaps:113/504 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GIGKASVWHAVIVTFMHYFSWGLLTVPFIEKLSGSF-------GNRVLLVDGLVYGVRGILGFVT 76
            |:|     |..|..|::.|| ..:..|.|..:|.:.       .:..:.:.|....:.|:...:.
plant     9 GLG-----HLFITIFLYCFS-SFIVAPVITDISMAALCPGKDECSLAIYLSGFQQVITGVGSLIM 67

  Fly    77 TPVMGAISDFHGRKVVMLLAVATTYAPIPFMMLKS-----WWFFAILTVSSI-C-GSTYSSSLAY 134
            .|::|::||.||||.::.|.:.....|:..:....     :.::.:.|::|| | ||....:|||
plant    68 MPLVGSLSDKHGRKCLLTLPMTLNILPLVTLAYSRGATIFYMYYVLKTLTSIVCEGSVLCLALAY 132

  Fly   135 VADTTTVENRSKGYGI---------VAASFGA-----GIAFSPSLGNYLMKSYGSASVILIAAIT 185
            |||......|:..:||         |.|:..|     |:.|.                  :||..
plant   133 VADNVPEGRRASAFGILTGITSCAFVCANLSARFLSIGVTFQ------------------VAAAM 179

  Fly   186 GLINIMFIIFAVPESLVLKEKNNMLDEESDNKMEDINPKERKEILNREEKLNNHVSANKSNHGTS 250
            |:::.:::...:|:|:    ::|.|....              ::|  |||::.:..:...|   
plant   180 GILSTLYMRLFLPDSI----RDNSLGAPI--------------VIN--EKLSSPLLEDCPGH--- 221

  Fly   251 QNLVTNKELGQQFNKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITFLSIWP 315
                               :|.:....::         :.|:....|....|..:.:::|.|...
plant   222 -------------------RNRIFRAIRL---------VHEMASLMRSSVPLFQVAMVSFFSSLA 258

  Fly   316 FAGVDSTAPVYLKTNMGFEYEEVSMMLGLLSVLAITSNLL-LGYIINIVGAKWSIRLGLLLLLLQ 379
            .||:.:::..|||....|..::.:.::.::......|.|| :..::..:..:..:.:||......
plant   259 EAGLHASSMYYLKAKFHFNKDQFADLMIIVGASGSISQLLFMPVLVPALKEERLLSIGLFFGCAH 323

  Fly   380 LFFFGFGTHHWMYWLSSILAALATIIPAANNAVASIYASPDNRGAVLGIISGIECLSEGVGPAFF 444
            :|........|:.::::|.|..:....:...::.|...:...:|...||||.|..|:..:.|..|
plant   324 MFLLCVAWSSWVPYMAAIFALFSIFPSSCMRSIVSKQVASYEQGKAQGIISSICSLANVISPLAF 388

  Fly   445 GVLFFIFQDDSKNKVNSPISMP-FVISAIGVFVAIVLTGFIKKETVEKA 492
            ..|...|..:     .:|.:.| |.|...|..:.|   .||:...:..|
plant   389 SPLTDWFLSE-----RAPFNFPGFSIMCAGFAMTI---AFIQSLMIRAA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 92/489 (19%)
MFS_1 30..441 CDD:284993 80/439 (18%)
AT5G42210NP_001318729.1 MFS_SLC46_TetA_like 13..425 CDD:340888 92/489 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2614
eggNOG 1 0.900 - - E1_KOG2816
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 95 1.000 Inparanoid score I2229
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D582396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1054
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23504
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.970

Return to query results.
Submit another query.