DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18281 and CG5078

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster


Alignment Length:496 Identity:177/496 - (35%)
Similarity:275/496 - (55%) Gaps:81/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KF-LRPLVKVLVNRSGIGKASVWHAVIVTFMHYFSWGLLTVPFIEKLSGSFGNRVLLVDGLVYGV 68
            || |:.|:..|.:.|||||.||.|.::|.|:.||:|||||:|.|..|..:|.:...|::|||.||
  Fly     3 KFGLKKLLVSLASTSGIGKPSVGHILVVVFLEYFAWGLLTMPMIATLKETFPDHTFLMNGLVMGV 67

  Fly    69 RGILGFVTTPVMGAISDFHGRKVVMLLAVATTYAPIPFMMLKSWWFFAILTVSSICGSTYSSSLA 133
            :|||.|:::|::||:||.:||||::|:.|..|..|||.|.:.:||||.|.::|.:.|.::|.:.|
  Fly    68 KGILSFLSSPLIGALSDIYGRKVLLLITVIFTSLPIPMMTMDNWWFFVISSISGVLGVSFSVAFA 132

  Fly   134 YVADTTTVENRSKGYGIVAASFGAGIAFSPSLGNYLMKSYGSASVILIAAITGLINIMFIIFAVP 198
            ||||.||.|.||:.|.:|:|:|.|.:..:|::||.:|..||..:|:|:|.:....|:||::.|||
  Fly   133 YVADVTTKEERSRSYELVSATFAASLVIAPAMGNLIMDRYGINTVVLVATLVSTTNVMFVLLAVP 197

  Fly   199 ESLVLKEKNNMLDEESDNKMEDINPKERKEILNREEKLNNHVSANKSNHGTSQNLVTNKELGQQF 263
            |:|                                                           ||.
  Fly   198 ETL-----------------------------------------------------------QQN 203

  Fly   264 NKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITFLSIWPFAGVDSTAPVYLK 328
            .:...|             |...:|.:..||:...|.|:|::.::.|..:.|.||..|:.|.|||
  Fly   204 VRSTGL-------------SWKQADPFLSLRRVGSDPNVLLLCVVMFTFLLPEAGEYSSVPAYLK 255

  Fly   329 TNMGFEYEEVSMMLGLLSVLAITSNLLLGYIINIVGAKWSIRLGLLLLLLQLFFFGFGTHHWMYW 393
            ..|||::.|:|.::..:::|.|:.|:.||.|:..:|||.:|.|||||.||||..|..|...|..|
  Fly   256 LTMGFDFTELSTLVAFMAILGISINVTLGSIVKTLGAKNAIILGLLLELLQLILFAIGYEKWQMW 320

  Fly   394 LSSILAALATIIPAANNAVASIYASPDNRGAVLGIISGIECLSEGVGPAFFGVLFFIFQDD-SKN 457
            |:..:|||::|...|.:|..|:|...:.:|||.|:|:|:..|..|:|||.||::|::...| .||
  Fly   321 LAGNVAALSSITFPAVSAYVSLYTDVETQGAVQGMITGMSGLCSGLGPALFGIVFYLSDMDLDKN 385

  Fly   458 KV-------NSPISMPFVISAIGVFVAIVLTGFIKKETVEK 491
            ::       :..::.||:|.||.||:.|:|..:|..|.|.:
  Fly   386 RILIGSVSGDRTVTNPFMIGAISVFIGILLASYIPDEKVSR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 163/467 (35%)
MFS_1 30..441 CDD:284993 143/410 (35%)
CG5078NP_649238.3 MFS 27..375 CDD:119392 148/419 (35%)
MFS_1 27..368 CDD:284993 143/412 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470059
Domainoid 1 1.000 91 1.000 Domainoid score I2614
eggNOG 1 0.900 - - E1_KOG2816
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 95 1.000 Inparanoid score I2229
Isobase 1 0.950 - 0 Normalized mean entropy S2848
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139531at33208
OrthoFinder 1 1.000 - - FOG0001490
OrthoInspector 1 1.000 - - mtm1054
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23504
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.850

Return to query results.
Submit another query.