DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18281 and Cln7

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001261508.1 Gene:Cln7 / 38813 FlyBaseID:FBgn0035767 Length:546 Species:Drosophila melanogaster


Alignment Length:595 Identity:98/595 - (16%)
Similarity:199/595 - (33%) Gaps:226/595 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 WHAVIVTFMHYFSWGLLTV----------PFIEKLSGSFGNRVLLVDGLVYGVRGILGFVTTPVM 80
            |.:|.:.   ||:..|:.:          |::.||....|...:   ||:.....:...:.:|:.
  Fly    34 WRSVRII---YFTMFLMALGFSIILTGIWPYLNKLDPDAGKEFM---GLIVAANPLGQMIFSPIF 92

  Fly    81 GAISDFHGR-KVVMLLAVAT-TYAP------------IPFMMLKSWWFFAILTVS-SICGSTYSS 130
            |...:..|: ::.:||:::. |.|.            :.:.||.|.:...:.:.: ::|.|    
  Fly    93 GWWGNKLGKIRLPLLLSLSLFTLASGIYSSLELRPDNVKYWMLSSRFLIGVSSANIALCRS---- 153

  Fly   131 SLAYVADTTTVENRSKGYGIVAASFGAGIAFSPSL----------GNYLMKSYGSASVILIAAIT 185
               |::..|.:..|:....:|:.:...|....|:|          |:..:  :|.....:..| :
  Fly   154 ---YLSAATRISERTHAVAMVSLAQVLGFIIGPTLQAAVTPLGDQGHVWL--WGKMHFNMYTA-S 212

  Fly   186 GLINIM-----FIIFAVPESLVLKEKNNMLDEESDNKMEDINPKERKEILNREEKLNNHVSANKS 245
            |.||::     |::| :|...                       |..:|..||..:         
  Fly   213 GWINVLMSIGNFMMF-LPGVF-----------------------EEHKIAAREVMV--------- 244

  Fly   246 NHGTSQNLVTNKELGQQFNKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITF 310
                                   :|...:|||           .|:.::.|......|::..  |
  Fly   245 -----------------------MQGGTSEKE-----------TWKGIKPSYLSAWTLIVAF--F 273

  Fly   311 LSIWPFA-----GVDSTAPVYLKTNMGFEYEEVSMMLGLL----SVLAITSNLLLGYIINIVGAK 366
            :.::.|.     |...|..::..:|     :|....:|::    :::::.:.:|:..:..|:..:
  Fly   274 VLVFNFVLLETLGTSLTMDMFAWSN-----DEALWYMGIMMTTAAIVSLVTFVLIEPMCKIIAER 333

  Fly   367 WSIRLG--LLLLLLQLFFFGFG----------------------------THHWMYWLSSILA-- 399
            :.:..|  .|:.|.::.|..:|                            |..|...|.::..  
  Fly   334 YVLIWGGFSLMFLGRVLFVPWGPDPPKLAQPFNASWNLSESDPIFLGCPTTQKWCGELPALTLTQ 398

  Fly   400 -----ALATI-IPAANNAVASIYA---SPDNRGAVLGIISGIECLSEGVGPAFFGVL------FF 449
                 |..:| .|.....:.:|::   .|..:|..:|.::|..|||..:||.|.|.:      |:
  Fly   399 FIIGFAFTSIGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGPVFVGSIYTRLGTFW 463

  Fly   450 IFQDDSKNKVNSPISMPFVISAIGVFVAIVLTG---------------FIKKETVEKAPLI---- 495
            .|                     ||..|::|..               |.|...||...|.    
  Fly   464 TF---------------------GVTSAMMLVSMFWLQCSNRLLIPPTFEKTTPVELKELNKHNG 507

  Fly   496 YKIIDDASED 505
            .|::||.|.|
  Fly   508 SKLLDDHSPD 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 89/569 (16%)
MFS_1 30..441 CDD:284993 76/500 (15%)
Cln7NP_001261508.1 MFS 37..479 CDD:119392 87/552 (16%)
MFS_1 40..449 CDD:284993 76/498 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440184
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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