DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18281 and mrva

DIOPT Version :9

Sequence 1:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster


Alignment Length:253 Identity:54/253 - (21%)
Similarity:85/253 - (33%) Gaps:83/253 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KASVWHAVIVTFMHYFSWGLLTVPFIEKLSGSFGNRVLL-------VDGLVYGVRGILGFVTTPV 79
            |...|...|:...:|    :...|||......|.:|..|       ||.|||    ::..|::||
  Fly   270 KPPFWMVSIICVAYY----VAIFPFIALGQNFFVDRFGLSPAEANTVDSLVY----LIAAVSSPV 326

  Fly    80 MGAISDFHGRKVVMLLAVATTYAPIPFMMLKSWWFFAIL-TVSSICGSTYSSSLAYVADTTTVEN 143
            .|.|.|..||.|                   :|.|.|.| |:.:....|::....||.    :..
  Fly   327 FGFIIDKLGRNV-------------------TWVFTATLTTIGAHALLTFTQLTPYVG----MII 368

  Fly   144 RSKGYGIVAAS-------------FGAGIAFSPSLGNYLMKSYGSASVILIAAI----------- 184
            ....|.::|||             .|....|..|:.|     .|.|.:.::|.|           
  Fly   369 MGLSYSMLAASLWPLVALIIPEYQLGTAYGFCQSIQN-----LGLAVITIVAGIIVDHSGGEHMW 428

  Fly   185 -----TGLINIMFIIFAVPESLVLKEKNNMLDEESDNKMEDINPKERKEILNREEKLN 237
                 .|.:.|..|...|..:...|.:.|:          ::.|::|.:.::.|...|
  Fly   429 LQLFFMGWLTIALISTGVIWAYNNKNRGNL----------NMTPQQRAQFVSAENYQN 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18281NP_649236.1 MFS 25..485 CDD:119392 53/250 (21%)
MFS_1 30..441 CDD:284993 52/245 (21%)
mrvaNP_001261505.1 MFS 55..448 CDD:119392 48/213 (23%)
MFS_1 58..410 CDD:284993 41/175 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440190
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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